KEGG   Nicotiana tomentosiformis: 104107666
Entry
104107666         CDS       T05025                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nto03041]
    104107666
   03009 Ribosome biogenesis [BR:nto03009]
    104107666
Enzymes [BR:nto01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104107666
Spliceosome [BR:nto03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    104107666
Ribosome biogenesis [BR:nto03009]
 Eukaryotic type
  90S particles
   Helicases
    104107666
  Pre-60S particles
    104107666
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 eIF3_subunit
Other DBs
NCBI-GeneID: 104107666
NCBI-ProteinID: XP_009614823
Position
Unknown
AA seq 566 aa
MAEVEENPNAVVAEEESIKKKRKRNRDKKNKMVTEKETKKAEVSEDREEEENDVEEQHNE
LKEEIKKEMKSGSGIMTTELFSSLEISEPTMKSINDMGFQHMTQIQARAIAPLLEGKDVL
GAARTGSGKTLAFLIPAVELLYNVRFTPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQ
TLALVIGGSARRAEADRIAKGANLLVATPGRLLDHLRNTKGFIYKNLKCLMIDEADRILE
ANFEEDMQQIIKLLPKQGRQTALFSATQTKKVEDLARLSLDKPVYIDVDDGRRRVTNEGL
QQGYCVVPSAKRFLLLYSFLKRNLSKKIMVFFSSCNSVKFHSELLRYIKIECCDIHGKQK
QQKRTSTFFEFCEAKTGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGE
GAKGNALLFLIPEELQFLKYLKAAKVPVKEYEFDHKKVANVQSLLEKLVANNYYLNQSAK
EAYRSYILAYNSHSMKEIFNVHRLDLQAVACSFCFSNPPKVHLNIDSNASKFRNKKRKVE
GSRNGFSENNPYGKKGSDDTRQFVRY
NT seq 1701 nt   +upstreamnt  +downstreamnt
atggcggaggtagaagaaaaccctaatgcagtagttgcagaagaagagtcaattaagaag
aagagaaagagaaatagagacaagaagaataaaatggtcacagaaaaagagacgaagaag
gcagaagtaagtgaggacagagaagaagaagagaatgatgtagaagagcagcataatgaa
ctgaaggaggagattaagaaagagatgaagagtgggtccggtattatgactacggagttg
ttttcttctcttgaaatttctgagcccactatgaagtccatcaacgacatgggctttcag
cacatgactcagatccaagccagggcaattgctcctcttctggaaggcaaagatgtcctt
ggagctgcaagaactggttctggtaaaacacttgcatttctgataccagccgtggagttg
ttgtataatgtccgttttacacctcgtaatggaactggggttattgtcatttgcccaaca
agagaactggctatacagacgcatgctgtggcaaaggaccttctcaagtatcattcgcag
actctcgccttggttattggtggttcagcaagaagagcagaggcagatcgtattgcaaaa
ggggctaatctcttagtagccacccctggtcggcttcttgatcatcttagaaataccaaa
ggcttcatttataagaacctaaagtgtctcatgattgatgaggctgataggattttggaa
gcgaactttgaggaagacatgcagcaaatcattaaacttctaccaaagcaggggaggcag
actgctctcttttcagccacacaaacaaaaaaggttgaggaccttgctcgcttatctttg
gacaaacctgtctacattgatgtggatgatgggaggaggagggttacaaacgaagggctg
caacaaggatactgtgttgtcccaagcgctaagagatttcttctcctttattcattcttg
aagaggaacctgtcaaagaaaataatggttttcttctcgtcttgcaactctgtcaagttt
cattcagagctacttcgctatatcaagattgaatgctgtgatattcatgggaagcaaaag
cagcaaaaacgaacttctaccttttttgaattctgtgaagccaaaacaggcatcctgtta
tgcacggatgtcgctgcacgtggtcttgatattcctgctgtggattggattgtgcagttt
gatccccctgatgaacccaaggagtatatacacagagttggtcgaacagcacgtggggaa
ggtgctaaaggaaatgcattactattcttgattccagaagagttgcagtttcttaagtac
ctcaaggcggcaaaagtgcctgtaaaagaatatgaatttgatcataagaaggtggccaat
gtgcagtcactcctggaaaaattggtcgcaaacaactattacttgaaccagtcagctaaa
gaggcatataggtcctatatactagcatataattctcattccatgaaggaaatattcaat
gttcaccgacttgatctacaggctgtagcttgttcgttctgtttctctaatcctccaaaa
gtacacctcaacatagatagcaatgcatccaaattcaggaacaaaaagcgtaaagttgaa
ggaagccgaaatgggttcagtgagaacaatccttacggaaagaaaggaagtgacgataca
aggcagtttgtaagatattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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