KEGG   Nicotiana tomentosiformis: 104119405
Entry
104119405         CDS       T05025                                 
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
  KO
K20827  RNA polymerase II-associated protein 2 [EC:3.1.3.16]
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nto01009]
    104119405
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nto03021]
    104119405
Enzymes [BR:nto01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     104119405
Protein phosphatases and associated proteins [BR:nto01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   104119405
Transcription machinery [BR:nto03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     104119405
SSDB
Motif
Pfam: RPAP2_Rtr1
Other DBs
NCBI-GeneID: 104119405
NCBI-ProteinID: XP_009629188
Position
Unknown
AA seq 680 aa
MRQKYYNIEVLGKSSLMANEEVIAVKDAIHKLQLCLLEGIKDENQLFAAGSLLSRRDYQD
VVTERSIVNMCGYPLCSNSLPSERPSKGHYRISLKEHKVYDLHETYTYCSTNCVVNSGAF
ARSLQDERSTTLNTAKLNEVLKLFVGLHLHSIEDVKENGDLGLSKLKIQEKLDVKGGEVS
MEEWMGPSDAIEGYVPQRDRSVKPALLNNIKKGFKNKQTKLQNEKNMILNEMDFSSTIIT
QDGYSSSKLPVSVNVVSSKKVKEAQTKTSYEGRDADVSILGKQVDALQLHSGEETEKTDS
NDRSYKVDKFDNGEVSSGPCQHDVKNISLEVLDMSDAGREHASDGAREKQSLRSSLKSSN
YTKMTRSVTWADENIDNGTVKKMECSSEISEEADQAYRGSGPTDMEEVDDSYRFESAEAC
AAALKQAAKAVASGSDVPDAVSNAGIIILPPPQEVDKAILQENDEVLDTKPAPLKWPRKQ
GVPNYDVFESEDSWYDSPPEGFNLNLSPFATMFNSLFTWISSSSLSFIYGNDESSNEEYL
SINGREYPRKIVLSDGRSTEIKQTLARCLARALPELVADLRLPVPISVLEQGVVLLIDTM
SFVDPLPAFRIKQWQLIVLLFLDALSICRIPVLTPYMTGRRTLLPKVLDGAQISAVEYEI
MKDLIIPLGRVPQFSMQSGG
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgagacaaaaatactacaatattgaagtacttgggaagagttctctgatggcaaatgaa
gaagtcatcgctgttaaagatgctatccacaagctgcaactctgtcttcttgaaggcatt
aaagatgaaaaccaactctttgctgctgggtctttgctgtcccggagggattatcaggat
gtagtaactgaacgctcaatagtaaacatgtgcggttatcctctttgcagcaactctctg
ccttctgaaaggcctagcaagggacattaccggatatcattgaaggagcataaagtttat
gatcttcacgaaacatacacgtactgttcaacaaactgtgttgtcaacagtggagcattt
gctcgtagcttgcaagatgagagaagcactactttaaataccgcaaaacttaatgaagtc
ctgaagctatttgtgggattgcatttgcattccatagaggatgtgaaggaaaatggagat
ctaggattatccaagttgaagattcaggaaaaactggatgtaaagggtggtgaagtttca
atggaagagtggatgggtccatctgacgcaattgaaggctatgttccacagagagatcga
agtgtgaagccagcactgctgaacaacattaagaaaggattcaagaataagcagaccaaa
ctccaaaatgagaaaaacatgatactaaacgagatggacttttccagcactataataact
caagatgggtatagcagttcaaagttaccagtttctgtcaatgttgtctcaagtaaaaag
gttaaagaagcacaaacaaaaacaagctatgaaggtagggatgctgatgtttctatattg
gggaagcaagttgatgccttgcagttgcattctggagaagaaacagaaaaaacagattcg
aatgatagaagttataaggtcgataaatttgacaacggagaagtgtcttctggtccttgc
caacatgatgtcaagaacataagtcttgaggtactagatatgtctgatgccggaagagaa
catgcatcagatggtgcacgtgaaaaacaatcgctcagatcttctctaaaatcctcaaat
tacacgaaaatgactcgttcagttacttgggctgatgaaaatattgataatggcactgta
aagaaaatggagtgttcatccgaaatatcagaagaagcggatcaagcttataggggatca
ggccctacagacatggaagaggttgatgattcatatcgatttgaatctgcagaagcatgt
gcagcagcactaaaacaagcagcaaaggctgttgcctcaggttctgatgtccctgatgct
gtgtccaatgccgggattataatattgccacctccacaagaagtggataaagcaatactt
caggagaacgatgaggtgcttgatacaaaaccagctcctttaaaatggccaagaaaacaa
ggggtgccaaattatgatgtttttgaatcagaggactcttggtatgatagtccaccagag
gggtttaatttgaatctgtcacctttcgctacaatgtttaattcactcttcacatggata
tcatcatcgtccttgtcatttatatatggcaacgatgaaagctctaatgaggagtatttg
tctatcaatggaagagaatatcctcgcaaaattgtgttatctgatggccggtcaactgag
atcaagcagactcttgctcgctgtctcgctcgagcattaccggaattggttgctgacctt
aggctgcctgtaccaatatcagttttagagcaaggagtggttctcttgatagatacaatg
tcttttgtggatccactccctgcattcagaataaagcagtggcaactaattgttcttctg
tttcttgatgctctttccatatgtaggatacctgtactgactccatatatgacagggaga
aggactttgcttccaaaggtgcttgatggtgctcagataagcgcagtggaatatgagatc
atgaaagatctaatcattccactaggtcgagtgcctcagttttcaatgcaaagtggaggc
taa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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