KEGG   Nocardia terpenica: CRH09_13440
Entry
CRH09_13440       CDS       T05168                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ntp  Nocardia terpenica
Pathway
ntp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ntp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CRH09_13440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ntp03400]
    CRH09_13440
DNA repair and recombination proteins [BR:ntp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CRH09_13440
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CRH09_13440
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_5 AAA_16 DUF87 AAA_30 UB2H AIG1 nSTAND3 AAA_7 Helicase_RecD
Other DBs
NCBI-ProteinID: ATL67056
UniProt: A0A291RHJ6
Position
3034114..3036285
AA seq 723 aa
MAFASELPAEGTTPLAHSEFRPIGEIERADGRFEVVSEHRPAGDQPTAIEELERRLTGGE
RDVVLLGATGTGKSATAAWLIERLQRPTLMMAPNKTLAAQLANELREMLPHNAVEYFVSY
YDYYQPEAYIAQTDTYIEKDSSINDDVERLRHSATQSLLSRRDVVVVASVSCIYGLGTPQ
SYLDRSVMLEVGGEVDRDRLLRLLVDIQYTRNDMAFTRGSFRVRGDTVEIIPSYEELAVR
IEFFGDEIEALYYLHPLTGDVVRQVERLRIFPATHYIAGPERMERAVRDIEVELDERLAE
LERHGKLLEAQRLRMRTQYDLEMIRQVGFCSGIENYSRHIDGRPAGSAPATLLDYFPEDF
LLIVDESHVTVPQIGGMYEGDMSRKRNLVEYGFRLPSAVDNRPLTWEEFAERIGQTVYLS
ATPGPYELGQTGGEFVEQVIRPTGLIDPHVVVKPTKGQIDDLVHEIRLRTERDERVLVTT
LTKKMAEDLTDYLLGLGVRVRYLHSEIDTLRRVELLRQLRLGDYDVLVGINLLREGLDLP
EVSLVAILDADKEGFLRSATSLIQTIGRAARNVSGEVHMYADKITDSMRQAIDETERRRA
KQIAYNEANGIDPTPLRKKIADILDQVYREADETEVEIGGSGRNASRGRRAQGEPGRAIS
AGVYEGRDIANMPRAELADLVKELTDQMMNAARELQFELAGRLRDEIADLKKELRGMDAA
GLK
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggctttcgcatccgagcttcccgccgaggggaccacaccgctggcgcattcggagttc
cggcccatcggcgagatcgagcgggccgacggccggttcgaggtggtcagcgagcaccgc
cccgccggcgatcagccgaccgccatcgaggaactggaacgccgcctcaccggcggcgaa
cgggatgtggtgctgctgggcgccaccggcaccggcaagtcggcgacggcggcgtggctg
atcgagcgcctgcagcgccccaccctcatgatggcgccgaacaagacgctggccgcgcag
ctggccaacgagctacgggagatgctgccccacaacgcggtcgagtacttcgtctcgtac
tacgactactaccagcccgaggcgtacatcgcgcagaccgatacctatatcgagaaggac
agctccatcaacgacgatgtcgagcgcctgcgccactccgccacccagagcctgctgtcc
cgccgcgacgtggtggtggtcgcgtcggtgtcgtgcatctacggcctcggtacgccgcag
tcctatctggaccggtcggtcatgctcgaggtcggcggcgaggtcgaccgcgaccggctg
ctgcggctgctggtcgacatccagtacacgcgcaacgatatggccttcacccgcggcagc
ttccgggtccgcggcgacaccgtcgagatcatcccgtcctacgaggagctcgcggtccgc
atcgaattcttcggtgacgagatcgaggcgctgtactacctgcacccgctcaccggcgac
gtggtgcgccaggtcgagcgcctgcgcatcttcccggccacccactacatcgccgggccc
gagcgcatggaacgcgcggtccgcgacatcgaggtcgaactcgacgagcggctggccgag
ctggaacgccacggcaagctgctcgaggcgcagcggctgcgcatgcgcacccagtacgac
ctcgagatgatccgccaggtcgggttctgctcgggcatcgagaactactcgcgccacatc
gacggccgcccggccgggtccgccccggccaccctgctcgactacttccccgaggacttc
ctgctcatcgtcgacgagtcgcacgtgaccgtcccgcagatcggcggcatgtacgagggc
gacatgtcgcgcaagcgcaacctcgtcgaatacggcttccggctgccgtcggccgtcgac
aaccggccgctcacctgggaggagttcgccgagcgcatcggccagaccgtatacctgtcg
gccacccccggcccgtacgaactggggcagaccggcggcgaattcgtcgagcaggtcatc
cgcccgaccggcctgatcgacccgcacgtggtggtcaagccgaccaagggccagatcgac
gacctggtgcacgagatccggctgcgcaccgagcgcgacgagcgcgtgctggtcaccacc
ctcaccaagaagatggccgaggacctcaccgactacctgctcgggctcggcgtgcgggtg
cggtacctgcactccgagatcgacacgctccgtcgcgtcgaactgctccgccagctccgc
ctcggcgactacgacgtgctggtcggcatcaacctgctgcgcgagggtctcgacctgccc
gaggtgtcgctggtcgccatcctcgacgccgacaaggagggcttcctccgcagcgccacc
agcctcatccagaccatcggccgcgcggcccgcaatgtgtccggcgaggtgcacatgtac
gccgacaagatcaccgactcgatgcgccaggccatcgacgagaccgagcgccgccgcgcc
aagcagatcgcctacaacgaggccaacggcatcgacccgacaccgttgcgcaagaagatc
gccgacattctcgaccaggtgtatcgggaggccgacgagaccgaggtcgagatcggcggc
tcgggccgcaatgccagccgcggccgccgcgcccagggcgagccggggcgcgcgatcagc
gcgggcgtctacgagggccgcgacatcgcgaacatgccgcgcgccgaactcgccgacctg
gtcaaggaattgaccgaccagatgatgaacgccgcccgcgagctccagttcgagctggcg
ggccggctacgcgacgagatcgccgacctgaagaaggaactgcggggcatggacgcggcc
ggtctgaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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