KEGG   Nocardia terpenica: CRH09_20900
Entry
CRH09_20900       CDS       T05168                                 
Name
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ntp  Nocardia terpenica
Pathway
ntp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ntp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CRH09_20900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ntp03400]
    CRH09_20900
Enzymes [BR:ntp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CRH09_20900
DNA repair and recombination proteins [BR:ntp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CRH09_20900
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C
Other DBs
NCBI-ProteinID: ATL71968
UniProt: A0A291RXI5
Position
complement(4749032..4749958)
AA seq 308 aa
MLATAGDLPADDSRWGYEVKFDGIRAIGYVDDGLRLMSRNDKNITPAWPELADLAPASPP
FVVDGEIVAFTEDGRTSFEALQPRMHQRNPATIRTLAAAVPAAYMIFDLLHIGDRPLIDL
PYRQRRELLEQLAPHGPHWQVPPRLHGRGADVLAESQRLGLEGIVCKRLDSTYTPGRRTP
LWTKVKNSRDQEIAIVGWRPGTGRRAGHIGSLLMAVPGRDGTLIYIGNVGTGFTQATLDD
LRTRLRPLERGTPTVEADVPDAIWVAPELVGEVSFTEWTNNRTTGERRLRHPSWRGLRPD
KTPDQIEW
NT seq 927 nt   +upstreamnt  +downstreamnt
atgctggcgacggcgggcgatcttcccgccgacgattcccgctggggctacgaggtcaaa
ttcgacggcatccgcgcgatcggatacgtcgacgacggcctgcgactgatgtcgcgcaac
gacaagaacatcacgcccgcctggcccgaactcgccgatctcgccccggcgagcccgccc
ttcgtcgtcgacggcgagatcgtcgccttcaccgaggacggccggacctcgttcgaggcg
ctgcaaccgcgcatgcaccagcgcaatcccgccacgatacgcaccctcgccgccgccgtc
cccgccgcctacatgatcttcgacctgctgcacatcggcgaccgcccgctgatcgacctg
ccctaccggcaacgacgagaactgctggagcaactcgcgccgcacggcccgcactggcag
gtcccgccgcgactgcacggccggggcgcggacgtgctcgccgaatcccagcgcctcggc
ctcgagggcatcgtctgcaaacgcctcgacagcacctatacccccggccgccgcaccccg
ctgtggaccaaggtcaagaacagtcgcgaccaggaaatcgcgatcgtgggctggcgcccc
ggaaccggccgccgcgccggacacatcggctccctcctgatggccgtccccggccgcgac
ggcaccctgatctacatcggcaatgtcggcaccggtttcacccaggccacactcgacgac
ctgcgaacaagactgcgccccttggaacgcggcacccccaccgtcgaagccgatgtgccc
gatgccatttgggtggctcccgaactggtcggcgaggtctccttcaccgagtggaccaac
aaccggaccaccggagaacgacgcctgcgccacccttcctggcgcggcctgcgccccgac
aagacccccgaccagatcgaatggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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