KEGG   Candidatus Nitrosoglobus terrae: TAO_0594
Entry
TAO_0594          CDS       T05173                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ntt  Candidatus Nitrosoglobus terrae
Pathway
ntt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ntt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TAO_0594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ntt03021]
    TAO_0594
   03400 DNA repair and recombination proteins [BR:ntt03400]
    TAO_0594
Enzymes [BR:ntt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TAO_0594
Transcription machinery [BR:ntt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TAO_0594
DNA repair and recombination proteins [BR:ntt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TAO_0594
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BAW79964
UniProt: A0A1Q2SLG2
Position
628995..629213
AA seq 72 aa
MARLTVEDCIKHIDNRFLLILAAAKRARQLALGAEPSVPWDKDKPTVVALREIAEGHISP
DIMNEINVPRYL
NT seq 219 nt   +upstreamnt  +downstreamnt
atggcgcgtttgaccgtcgaagattgtattaaacatattgataaccggtttttgttaata
ttggccgcagctaaaagagcgcgacagctggctcttggagcggaaccctctgtgccttgg
gataaggataaacctactgtggtagccttacgtgagattgccgagggtcatatcagtcct
gatattatgaatgagatcaacgtgcctagatatctctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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