KEGG   Nematostella vectensis (starlet sea anemone): 5508737
Entry
5508737           CDS       T01037                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
nve  Nematostella vectensis (starlet sea anemone)
Pathway
nve03020  RNA polymerase
nve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    5508737
  09124 Replication and repair
   03420 Nucleotide excision repair
    5508737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nve03021]
    5508737
   03400 DNA repair and recombination proteins [BR:nve03400]
    5508737
Transcription machinery [BR:nve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     5508737
DNA repair and recombination proteins [BR:nve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      5508737
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 5508737
NCBI-ProteinID: XP_001629317
UniProt: A7SGE2
Position
Unknown
AA seq 117 aa
MNAPEPFEPFLLLDGDKKITITKDTKVPNAAHFVVNKEDHTLGNLLREQLLKDPQVIFAG
YKVSHPLEHKFVLRVQTTSDYSPQEAFTHAITDLISEVSLLEERFKAAVRDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaatgcccccgagccgtttgaaccctttctcttactagatggagataaaaagataacg
atcactaaagacaccaaggtcccaaatgccgcgcactttgtcgtgaacaaggaggatcat
accctgggtaacttactgagggaacaactcctgaaggatccccaagtgatatttgctggt
tacaaggtgtctcaccccttggaacacaagtttgtgcttcgtgttcagacgacatctgat
tatagtccccaggaagccttcacccacgccattacagacctcatcagtgaggtgtcatta
ctggaggagagatttaaggctgctgtccgtgacaaacaagaaggtatcgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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