KEGG   Nicrophorus vespilloides (burying beetle): 108564231
Entry
108564231         CDS       T04922                                 
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
nvl  Nicrophorus vespilloides (burying beetle)
Pathway
nvl04137  Mitophagy - animal
nvl04140  Autophagy - animal
nvl04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:nvl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108564231
   04137 Mitophagy - animal
    108564231
   04148 Efferocytosis
    108564231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nvl03000]
    108564231
Transcription factors [BR:nvl03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    108564231
SSDB
Motif
Pfam: PAS_3 PAS PAS_11 PAS_9 PAS_4 HIF-1a_CTAD HLH BTB_3 PAS_2 HIF-1
Other DBs
NCBI-GeneID: 108564231
NCBI-ProteinID: XP_017778692
Position
Unknown
AA seq 974 aa
MNCNENVDFTYHQPAPSECWYGHNDDFHANEVYGDHRQQQQHQEFVYTAARPMGPVAASL
SLPCQSYTNWDYDKQCYNYYAEGCYTSCQFVTVVDMEDFMNNEKRKEKCRDAARCRRSRE
TEIFTDLSNALPLSEDKVSQLDKASVMRLAIAYLKVRDMIKLVPEPKMVKDETEASCSEE
SLVLKSLDGFAVALSDEGDFIYVSENVYSFLGISQVDLMGQNVYDYCHPCDHDEIKDILS
AKSQQVGETSKSFFLRLKCTLTSKGRSVNLKSATYKVIHFTGHMLQEVDDSKESAEGCSS
SNSSNNTTANDGSFKKCLVAIGQPIQHPSNIEAPLPSQTFLTKHNMNMTFTYADEKMLEF
LGYNPEDLIGKSIYSYSHALDSEVITSAYKCLFSKGQTETSRYRFLAKTGGYAWVLTQAT
LIYDKNQKPQSVVCVNYVISEIECKDEIYAEFQLASASIASTPEPPTDVKTETTISVPQN
INDIVDTAELVVPEVIEEEQQTLPSSNTEKPESTTERLFHNIGNYLEEIRGSSQSPRPLT
ATSKIFAPRTKEMSKGYITFSDEEPGITMLKDEPEDLTYLAPEAGEVVSLGDRLFSETFL
NLVNMKDSKDDNTEQIGSMPSEDTNLFDGFFDSYSAIIGDPFIYKNEGLSQLLSPDRIVK
SSDCSMQSLNSPTDSFSDEDQMSSFVTLMEEDMDMKAPYIPMTMGEDLPLVLTNDLMWSS
NVERPARNTDPPKTTSSLAQLLSSGVNNKRPIRSNDHGGTIIQNNTSATTGSSFNDYYDK
GQVNWDLSKVVASTGMQSHKRLNSTSFESTSNKRTKCEPKSGMTSELLQQLMSNNTHSGN
RSRVASKGKSNWLLDSGGPKAACVSQPSESVLMNLLEMSSSPQNLKADRLISDRELEDFL
RAQQLKLAARIGEPQRSDGGGKRILRRGISLLSTDGIPSLFDLTQQDYEVNAPVNNFLLQ
GDDLLQALDATGNI
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgaattgtaacgagaacgtggactttacgtaccaccagccagcgccatctgaatgctgg
tacggtcataatgatgatttccatgctaacgaagtttatggcgaccatcgtcagcagcag
caacatcaggaattcgtgtacacggcggcgagacccatgggtcccgtcgccgccagcctc
agcctcccatgccagtcttatacaaactgggattatgataaacagtgttacaactactac
gccgagggatgttacacttcttgtcaatttgtaactgttgtcgatatggaagacttcatg
aataatgagaagcgaaaggagaaatgtcgcgacgccgctcgttgccgccggtcacgagag
acagagatattcacggatctatcgaatgcgttgcccttgtccgaagataaggtctcgcag
ctggacaaagcttccgtgatgcggctcgctatagcctatctcaaagtcagggacatgatc
aaattagtaccggaacctaagatggtaaaggacgagactgaggcatcctgttccgaggaa
tcgctcgttctcaaatcgctggacggattcgcagtcgccctatccgacgaaggcgacttc
atctacgtatccgaaaacgtatactctttcctaggcatctcgcaagtcgatctgatggga
caaaatgtatacgactattgccacccgtgcgatcacgacgaaatcaaagacattttgtcg
gcgaaatcgcagcaggtcggcgaaacatcaaagtcgttcttcctacgtctcaagtgtacc
ctcaccagcaaaggaagatcagtcaacctcaaatccgccacatacaaagtaatacatttt
actgggcacatgcttcaagaagtggatgatagcaaggaatcggcagaaggatgtagtagt
agtaacagcagcaacaataccacagcgaatgatggcagcttcaagaaatgtcttgtggct
atcgggcagccgattcagcatccttcgaatatcgaagcaccgctccccagtcaaactttt
ctcaccaaacataatatgaacatgacattcacgtatgccgatgaaaaaatgttagaattc
ctgggatacaaccccgaggacctcatcgggaaatcgatttattcgtattctcatgcattg
gattctgaagtcatcacatcggcctacaaatgcttattttctaaaggacaaactgagacc
agcagatacagattccttgccaagaccggaggttatgcctgggttttaactcaggccacg
cttatctacgacaaaaaccagaaaccacagagtgtcgtctgcgtgaattatgttataagt
gagattgagtgcaaagatgaaatatatgcagagttccaattggctagcgccagcattgca
tctacccctgaaccaccaactgatgtaaagacggagactactatatccgtgccacagaac
atcaacgacatcgtcgatacagccgaattggtagttccagaagttatagaggaagagcaa
caaactttaccttcgtccaacactgaaaaaccggaatctaccaccgagaggcttttccat
aatataggaaactacctggaagagattagaggttcgtcacaatcgcccaggccactgacg
gccacttccaaaatattcgctcccagaacgaaggagatgagcaaaggatatatcacattt
tcggatgaggaaccgggcatcaccatgttgaaagacgagcctgaagatttaacatattta
gcgccagaggctggtgaggtggtgagtttaggtgatcgtctcttcagtgagactttcttg
aacctggtgaacatgaaagactcgaaggacgataacactgaacaaatcggctcaatgccg
tccgaagacacaaatctgtttgacggctttttcgattcgtactccgctatcataggggat
ccgttcatatacaagaacgaagggttatcgcaactcttgtcgccagatcgcatcgtcaag
agttcggattgcagtatgcagtccttaaacagcccaacggactcgttcagtgacgaagac
cagatgtcatcgttcgtgactttgatggaggaggacatggatatgaaggctccgtatata
cccatgactatgggcgaagacctgccgttagtcctgactaacgacctcatgtggagttcg
aatgttgaaaggcctgcaaggaacaccgatcctcctaagacgacgtccagtctagcgcag
ttgcttagttctggagtaaacaacaaacgtccgatcaggagtaacgaccatggtggaacc
attatacagaacaacacgtctgcgacgacaggaagtagttttaatgattactatgacaaa
ggtcaggtcaactgggatttgtcgaaggtagtagcatccacaggtatgcaatcccataag
cgcttgaactcgacaagctttgagtcaacctcgaacaagaggacgaagtgcgaaccgaaa
tcgggcatgacttcggagctgctgcagcagttgatgtctaataacacgcatagtgggaac
cgttccagggtagcatccaagggcaagagcaactggttgcttgattccggcggtcctaag
gctgcctgtgtctctcagcctagcgaaagtgttctcatgaacctcctggaaatgtcgtct
agtccgcaaaacttgaaggctgaccgattgataagcgacagggaattggaggattttctg
agggcgcaacagctaaagttggcagcgagaataggagagcctcaaagaagcgacgggggc
ggaaagaggattctgcgtcggggcatctcattgttgagcacggacgggattccgtccctc
tttgacctgacccaacaggattacgaggttaacgccccggtaaacaacttcctgctacaa
ggtgacgacctcctgcaggcattagatgcaaccggtaacatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (60)   

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