KEGG   Nitrososphaera viennensis: NVIE_013670
Entry
NVIE_013670       CDS       T03200                                 
Symbol
rfcL
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
nvn  Nitrososphaera viennensis
Pathway
nvn03030  DNA replication
Brite
KEGG Orthology (KO) [BR:nvn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NVIE_013670 (rfcL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nvn03032]
    NVIE_013670 (rfcL)
DNA replication proteins [BR:nvn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     NVIE_013670 (rfcL)
SSDB
Motif
Pfam: AAA AAA_14 AAA_16 AAA_5 AAA_22 Rad17 AAA_7 RuvB_N AAA_25 AAA_33 AAA_28 AAA_18 AAA_17 nSTAND3 TIP49 ABC_tran NACHT Mg_chelatase DUF815 AAA_8 bpMoxR IstB_IS21 NTPase_1 RNA_helicase RsgA_GTPase AAA_30 AAA_3 AAA_19 TsaE AAA_29 Zeta_toxin Sigma54_activ_2 AAA_11 NB-ARC MMR_HSR1 SRP54 SKI DUF5906 ResIII
Other DBs
NCBI-ProteinID: AIC15606
UniProt: A0A060HPX5
Position
1162586..1163839
AA seq 417 aa
MWSEVHRPQRVEQMVGNEDARIAVVKWLSGWVSGTKPLLLVGPPGVGKTTIVHALARQFD
YDLVEMNASDVRNRDSIEARIKPVFANTGLFGRKILLFLDEVDGISGREDSGGLDALVDL
IKEPTVPVIMAANEKSAKIKELAKGCKVVEFAPVPPRLLLMFLDHVLAKEKAKLGPGDKV
SIVVNSGGDIRSLLNSAQSRAAGYATVSNRDVTEIDIADAINGYFAAKDRAAAMQALARA
DASFPDPRYEGMSPETRRKDMVATLFSSIVSSHAAADKESLAELLDVLSRADMVVGRVSR
NRQWSLLRYVRDMLAGGLYVKSRGKDIKYNQYTMPWPVMGPIFARSQTIRKIASAVGPAM
NVSRSTASSVVLPYLVRAIIDEKVDVSEFAVTNFGDESIGESLGKEVERAKGARKKQ
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgtggtctgaagtgcacaggccccagagggtggagcagatggttggaaacgaggacgca
aggatagcggtggtcaagtggctttcaggatgggtcagcggcacaaagccgctgctcctc
gtgggcccgccgggcgtcggcaagacgacaatcgtgcacgcccttgcgcgccagttcgac
tatgacctggtagagatgaacgcaagcgacgtgagaaaccgcgacagcatcgaggcaagg
ataaagccggtgtttgcaaacaccggactctttggccgcaagatattgctgttccttgac
gaggtggacggcatctcgggcagggaggactcgggcgggcttgacgcgcttgtcgacctg
ataaaagagcccaccgtcccggtgataatggccgcaaacgaaaagtcggcaaagataaag
gagctcgccaagggctgcaaggtagtcgagtttgcgcccgtcccgccgaggcttctcctc
atgttcctcgaccatgtgcttgcaaaggaaaaggccaagcttggccctggcgacaaggtg
tcgatcgtggtgaacagcggaggagacatcaggtcgctcctcaacagcgcccagtcgcgc
gcggccggatacgcgacggtgtcaaacagggacgtgacagagatagacattgcagacgcg
ataaacggctattttgcagccaaggacagggcggctgcaatgcaggcccttgcaagggcg
gacgcctcgtttcccgacccccggtacgagggcatgtcgccggagacaaggcgcaaggac
atggttgccacgctgttttcatccatcgtctcctcccacgctgcggcggacaaagagtcg
cttgcggaactgctcgacgtcctgtcaagggccgacatggtggtgggcagggtcagcagg
aaccggcagtggagcctcttgcgctatgtaagggacatgcttgccggcggcctgtacgta
aagtccaggggcaaggacatcaagtataatcagtatacgatgccgtggccggtgatgggc
cccatatttgcaaggtcgcagacgataaggaaaatcgcgtccgcagtagggccggccatg
aacgtgtcgaggagcactgccagctcggtcgtgctgccgtacctggttcgcgccatcatt
gacgaaaaggtggacgtttctgaatttgcagtcacgaactttggtgacgagtcgataggc
gagtcgctcgggaaggaagtcgagcgggcaaagggggccaggaaaaaacaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (39)   
   Pfam (39)   
All databases (47)   

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