KEGG   Neisseria weaveri: SAMEA3174300_1702
Entry
SAMEA3174300_1702 CDS       T04355                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
nwe  Neisseria weaveri
Pathway
nwe03030  DNA replication
nwe03430  Mismatch repair
nwe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nwe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAMEA3174300_1702 (dnaE)
   03430 Mismatch repair
    SAMEA3174300_1702 (dnaE)
   03440 Homologous recombination
    SAMEA3174300_1702 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nwe03032]
    SAMEA3174300_1702 (dnaE)
   03400 DNA repair and recombination proteins [BR:nwe03400]
    SAMEA3174300_1702 (dnaE)
Enzymes [BR:nwe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SAMEA3174300_1702 (dnaE)
DNA replication proteins [BR:nwe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SAMEA3174300_1702 (dnaE)
DNA repair and recombination proteins [BR:nwe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SAMEA3174300_1702 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C
Other DBs
NCBI-ProteinID: SAY51785
Position
1:1822793..1826230
AA seq 1145 aa
MTNPTYIPLRLHTEYSISDGTVRIKQAIKQAQAYGLPALGVSDLMNMFGLVKFYKACRGA
GIKPVAAADVWIENPAAPDKPFRAMLIVKNDSGYLRLSELLTAAYVGKDRNIDHAELRQA
WLAESDNSGLICLSGAHYGEVGVNLINGHPDAAKAAAQKYAAWFPNAFYLELQRLPERPQ
WEISVSGSLEIAAELDLPVVATHPTQFLNREDFQAHEARVCIAGGWVLADKKRPQEFTPS
QFFVSPDVMAERFADLPEALQNTVEIAKRCNLTLTLGKNFLPLFPTPDGMSLDDYLTQLS
NEGLQERMVQLYPDEAERAEKMPEYQARLDFELGIIIQMGFPGYFLIVQDFINWAKNNGC
PVGPGRGSGAGSLVAYALKITDLDPLKYALLFERFLNPERVSMPDFDIDFCQSNRGRVIE
YVREKYGADAVSQIVTFGTMSSKAVIRDVGRVLELPFGLCDRLSKLIPLEANRPVSLEKA
MEMEPEIRQLIEEEGAEELMTLAQKLEDLTRGLGMHAGGVLIAPGKISDFSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQENIKNTVGEEIDVNTIPLDDQAAYKI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQAFE
YIHPLLEPVLEPTYGIMVYQEQVMQAAQVIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AKGAEEKAISRKKADEIFDYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNADQLKHFYDDSRANGVTFLPPDINLSDYLFTPNKQKQIRYALGAIKGTGEAAVE
AIIAARNSGGAFTDLLDFCERVDKAHLNKRTIEALIRAGAFDNLNPNRAMLIANIDLAIS
NAEQKAANANQGGLFDFVEDAIDPVQMEAAPAWSESEKLAEEKQVLGFYLSGHPFSPYAK
EAKQIAPIHLGRLKPQDNIRIAGFATDIRSIMGKRGKIVFLTLEDQHGQAEIMVSGNVLE
ESAGCLKTDQALIVECKISRDDYNGGDALRIMANQVMTLQTARERYARSLHLYLTPQNNI
TELAELLQPYRSSSPGNGIPIKITYTNPAATGDLQASSKWLIKPDKTLFTQLENILGERG
LKVAF
NT seq 3438 nt   +upstreamnt  +downstreamnt
atgaccaatccgacctacatcccgcttcgcctgcataccgaatattcgatttcagacggc
accgtccgcatcaagcaagccatcaagcaagcccaagcctacggcctgcctgcgctgggc
gtgagcgatttgatgaacatgttcggcttggtaaaattctacaaagcctgccgcggcgca
ggcatcaagccggtggcggcggcggacgtgtggattgaaaaccccgccgcgcccgacaaa
cctttccgcgccatgttgattgtaaaaaacgacagcggctacctgcgcctgagcgaactg
ctcaccgccgcctatgtgggcaaagaccgcaacatcgatcatgccgaactacggcaggcg
tggctggccgagagcgacaacagcggccttatctgcttatcgggcgcgcattacggcgaa
gtgggtgtcaacctgatcaacggccaccccgacgcagccaaagcggcggcgcagaaatac
gcggcgtggtttcccaatgctttttacctcgaactgcaacgcctgcccgaacgcccgcaa
tgggaaatttcagtgtcgggcagcttggaaatcgcggcggaattggatctgccggtagtc
gccacccatccgacccagtttctcaaccgcgaagatttccaagcccacgaagcgcgggtg
tgcattgccggcggctgggtgctggcagataaaaaacgcccgcaagaatttacgccgagc
cagtttttcgtatcgcccgacgtgatggccgagcgtttcgccgacctgcccgaagcgtta
caaaacacggtggaaatcgccaaacgctgcaatctcacgctcacgctgggcaaaaacttt
ttgccgctgttccccacgcccgatggcatgtcgctcgacgattatctgacccaactttcc
aacgagggtctgcaagagcgcatggtgcagctttaccctgacgaagcggagcgcgccgaa
aaaatgcccgaatatcaggcacgcttggattttgaattgggcatcatcatccaaatgggc
tttccgggctacttcctcatcgtacaagacttcatcaactgggcgaaaaacaacggctgc
ccggtggggccggggcgcggttcgggcgcaggctcgctggtggcctacgcgctgaaaatc
accgacctcgacccgttgaaatacgcgctgctgttcgagcggttcttaaaccccgagcgc
gtttccatgcccgacttcgatatcgacttctgccaaagcaaccgcggccgcgtgattgaa
tacgtgcgcgaaaaatacggtgccgatgccgtgagccaaatcgttaccttcggcaccatg
tcgtccaaagccgttatccgcgacgtgggccgtgtgttggaattgccgttcggcctgtgc
gaccgcttgtcgaaactgattccgctcgaagccaaccgccccgtgagccttgaaaaagcg
atggaaatggagcccgaaatccgccagctgatcgaagaagaaggcgcggaagagttgatg
acgctggcgcaaaagctggaagacctcacgcgcggcttgggcatgcacgcaggcggcgtg
ttgattgcgccgggcaagatttccgacttcagccccgtgtatcaggccgacgaatccgcc
tcgcccgtgtcgatgtacgacaaaggcgacgtggaagacgtgggcttggtgaaattcgac
ttcttgggcctgcgcaacctcaccattatcgaaatggcgcaggaaaacattaaaaacacc
gtcggcgaagaaatcgacgtgaacaccattccgctcgacgaccaagccgcctacaaaatt
ttccgcgatgccaacaccaccgccgtcttccagtttgaatcgaccggcatgaaaaaaatg
ctgaaaacggcgcacaccaccaaatttgaagagttgattgccttcgtatcgctttaccgc
cccggcccgatggacaacattcccgatttcgtcgcccgcatgaaggggcaggcgtttgaa
tacatccacccgctgctggagccggtgttggagccgacttacggcatcatggtttaccaa
gagcaggtgatgcaggccgcgcaggtgatcggcggctactcgctcggcggtgccgatttg
ctgcgccgcgccatgggtaagaaaaaacccgaagaaatggtgaaacaccgcgaaattttc
gccaaaggtgcggaagaaaaagccatttcccgcaaaaaagccgacgaaattttcgactac
atggaaaaattcgccggctacggcttcaacaaatcacacgccgccgcctacgcgctgatt
tcctaccaaaccgcatggctgaaagcgcattatcccgccgaattcatggccgcgaccatg
tcgagcgagttggataatgcagaccagctcaagcatttttacgatgattcccgagccaac
ggcgttacctttctgcctccggacatcaacctatccgattatctgtttaccccgaataag
caaaaacaaatccgttacgcgctcggcgccattaaaggcacgggcgaggccgccgttgaa
gccattattgccgcacgaaacagcggcggagcatttaccgatcttttggatttttgcgaa
cgcgtcgacaaagcccatctaaacaaacggacaatcgaagccctcatccgcgccggcgca
ttcgacaacctcaaccccaaccgcgccatgctgatcgccaatatcgacttagccatcagc
aacgccgaacaaaaagccgccaacgccaatcagggcgggctgttcgacttcgtagaagat
gccatcgaccccgtgcagatggaagcggcccctgcgtggagcgaatcagaaaaactcgcc
gaagaaaaacaagtgctcggcttctacctttccggccatcctttcagcccctatgccaaa
gaagcaaaacaaattgcccctattcatttaggccgtctgaaaccgcaagacaacatccgc
atcgccggattcgccaccgacatacgcagcattatgggcaaacgcggcaagatcgtattc
ctgactctggaagaccaacacggccaggccgaaatcatggtcagcggcaacgtcttagaa
gaaagcgccggctgcctaaaaaccgaccaagcactgattgtagaatgcaaaatcagccgc
gacgactacaacggcggcgacgccctgcgcattatggccaatcaagtcatgactctgcaa
accgcccgcgaacgctatgcccgcagcctgcatctttacttaacgccgcaaaacaacatc
accgaattggcggaattattacagccctaccgcagcagctctcccggtaacggcattccg
ataaaaatcacctataccaatccggccgccaccggagatttacaagcctcatcaaaatgg
ctcatcaaacccgacaaaacgctttttacacaattggaaaacatattgggcgaacgcggc
cttaaagtagcgttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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