KEGG   Nitrobacter winogradskyi: Nwi_1350
Entry
Nwi_1350          CDS       T00276                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
nwi  Nitrobacter winogradskyi
Pathway
nwi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nwi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Nwi_1350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nwi03021]
    Nwi_1350
   03400 DNA repair and recombination proteins [BR:nwi03400]
    Nwi_1350
Enzymes [BR:nwi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Nwi_1350
Transcription machinery [BR:nwi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Nwi_1350
DNA repair and recombination proteins [BR:nwi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Nwi_1350
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: ABA04611
UniProt: Q3SSY0
Position
1480397..1484539
AA seq 1380 aa
MVQQTFTGRKRVRKFFGHIREVAEMPNLIEVQKASYDQFLMVDEPEGGRLDEGLQAVFKS
VFPINDFSGASQLEFVRYEFEAPKYDVDECRQRGMTYAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLMFALGLDGEEILSTFYKKIIYKRA
KSGGGSDGWRVPYDPVRFRGYSTLNDLIDADTGKVVLEAGKKLTVRAARQLQEKGLKALR
MSDEELVGMYLAEDLVNPKTGEIYAEAGEEITEKSLKALNEEGYKELPLLDIDHVNVGPY
IRNTLAADKNMTREDALFDIYRVMRPGEPPTLESAQNMFQSLFFDAERYDLSAVGRVKMN
MRLDLDAPDTYRTLRKEDILAVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRV
GLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITH
KRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGF
VETPYRKVKDGRVTDEVVYLSAMEEGRYHVAQANLPLDARGRFTEDLVVCRHAGEVLPVT
PDKVDFMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEG
VVARDSGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQ
RPLVKVGDIVRKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDV
FTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKSLDEAGIVYIGAEVRAGDILVGKI
TPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALA
IEREEIERLAKDRDDEQAILDRNVYGRLADLLENRQGIAGPKGFKKDTKITRAVLDEYPK
SQWWLFASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFV
AVKRKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILE
THLGWACAGLGRRIGQAVDAYLASAKQETKPLKETLKKVYGDNETIKSLEDHELVELGRN
LRRGVPIATPVFDGAKEADIEQMLELAGMDKSGQSTVYDGRTGDPFDRKVTVGYIYMLKL
HHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKS
DDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKIGDMMPTSEAAE
NT seq 4143 nt   +upstreamnt  +downstreamnt
atggtgcagcagacgttcaccggtcgcaagcgggttcgcaagttctttggacatatccgt
gaagtcgcggagatgccgaacctgatcgaggtgcagaaagcctcctacgatcagtttttg
atggttgacgagccggaaggcggccgcctggacgagggtttgcaggcggttttcaaatca
gtgtttccgatcaacgacttctccggcgcttcgcaactcgaattcgtgcgctatgagttc
gaggctccgaaatacgatgtcgacgaatgccgccagcgcggcatgacctatgccgctccg
ctgaaggtgacgctgcgcctgatcgtattcgatatcgacgaggagaccggcgcgaagtcc
gtgaaggacatcaaggagcaggacgtctacatgggcgacattccgctcatgacgatgaac
ggcaccttcgtcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcatcgttcgcct
ggcgtgttcttcgatcacgacaagggcaagactcattcgtcaggcaagctgctgttcgcc
gcgcgcgtgattccgtatcgcgggtcgtggctcgacatcgagttcgacgccaaggacatc
gtgttcgcgcgcatcgaccgtcgccgcaagattccggtgacgtcgctgatgttcgccctc
ggcctcgacggcgaggaaatcctcagcacgttctacaagaagatcatctacaagcgcgcg
aagtccggcggtggttcggacggctggcgcgtgccctatgatccggtccgtttccgcggc
tactcgacgctgaacgacctgatcgacgctgacaccggcaaggtcgtgctcgaggccggc
aagaaattgacggttcgcgccgcgcgccagcttcaggagaaggggctgaaggcgctgcgc
atgagcgacgaggaactcgtcggcatgtatctggccgaagacctcgtcaatccgaagacc
ggcgagatctatgccgaagccggcgaggagattaccgagaagtcgctgaaggcgctcaac
gaggaggggtacaaggagctgccgctgctcgacatcgaccacgtcaatgtcggcccctac
attcgcaacacgctggccgccgacaagaacatgacgcgcgaggacgcgctgttcgacatc
taccgggtgatgcgtccgggcgagccgccgacgctggagtcggcgcaaaacatgttccag
tcgctgttcttcgatgccgagcgctacgacctgtccgctgtcggccgcgtcaagatgaac
atgcgcctcgacctcgatgcgccggacacctatcgcacgctccgcaaggaggacatcctt
gcggtcatcaagacgctggtcgacctgcgcgacggcaagggagagatcgacgacatcgac
cacctcggcaatcggcgcgtgcgctcggtcggcgaactgatggaaaaccagtaccgcgtc
ggtctgttgcgcatggagcgggccatcaaggagcggatgtcctccgtcgacatcgacacc
gtgatgccgcaggatctgattaacgcgaagcccgcggctgccgcggtgcgcgagttcttc
gggtcgtcgcaactctcgcagttcatggatcagaccaacccgctttcggagatcacccac
aagcgccgcctgtcggcgcttgggccgggcggcctgacgcgcgaacgcgcaggcttcgag
gtgcgcgacgtgcatccgacccactacggccgcatctgtccgatcgagacgccggaaggc
ccgaacatcggcctcatcaactcgctcgcgacgttcgcgcgcgtcaacaaatacggtttc
gtcgagacgccgtaccgcaaggtgaaggacggccgcgtcaccgacgaggtggtctatctc
tccgcgatggaggaagggcgctatcacgtcgcgcaggccaacctgccgctcgacgcccgt
ggccgcttcaccgaggatctcgtggtctgccgtcatgccggcgaggtgctgccggtgacg
ccggacaaggtcgacttcatggacgtgtcgcccaagcagctcgtctcggtcgcggcggct
ttgatcccgttcctggagaatgacgacgccaaccgcgcgctgatgggctcgaacatgcag
cgacaggcggtgccgctggtgcgcgccgaggcgccgttcgtcggcaccggcatggaaggc
gtggtcgcgcgcgactcgggcgcggcgatcgccgcccgccgctccggcgtgatcgaccag
atcgacgccacccgcgtcgtcatccgcgcgacggaagatctcgatccgaccaagtccggc
gtcgatatctatcgcctcatgaagtaccagcgctcgaaccagtcgacctgcatcaaccag
cgtccgctggtgaaggtcggcgatatcgtcaggaagggcgacatcatcgcggacggcccg
tccaccgatctcggcgaactcgcgctcggccgcaacgtgctggtcgcgttcatgccgtgg
aacggctacaacttcgaagactcgatcctgctctcggagcggatcgtcaaggaagatgtt
ttcacctcgatccatatcgaggaattcgaagtgatggcccgtgacaccaagctgggccct
gaggaaatcacgcgcgacattccgaacgtttcggaagaggcgctgaagagcctcgacgaa
gccggcatcgtctacatcggcgccgaggtccgcgcgggcgacatcctcgtcggcaagatc
acgccgaagggcgaaagcccgatgactccggaagaaaagctgttgcgcgcgatcttcggc
gagaaggcttccgacgttcgcgacaccagtctgcgcgtgcctccgggcgtgcagggcacc
atcgtcgaagtccgcgtctttaaccgtcacggcgtcgacaaggacgagcgtgcgctggcg
atcgagcgggaggagatcgagcgtctcgccaaggatcgcgacgacgagcaggcgattctc
gaccgcaacgtctacggccgtctcgccgatctgctcgaaaaccgccagggcattgccggt
ccgaagggcttcaagaaggataccaagatcaccagggcggtgcttgatgagtacccgaag
tcgcagtggtggctgttcgcatcgccgaacgacaagctgatggccgagatagaggccatg
cgcaagcagtacgacgagtcgaagaagggcctcgagcagcgcttcctcgacaaggttgaa
aagctgcagcgcggcgacgagttgccgccgggcgtgatgaagatggtcaaggtcttcgtc
gccgtgaagcgcaagatccagccgggcgacaagatggctggccgtcatggcaacaagggc
gtggtttcgaagatcgttccgatcgaggatatgccgttccttgaggatggcacccacgcc
gacatcgttctcaacccgctcggcgtgccctcgcgcatgaacgtcggtcagattctcgaa
acccacctcggctgggcatgtgccggccttggcaggcggatcgggcaggccgtcgacgcc
tacctcgcgagcgcgaagcaggaaaccaagccgctgaaagaaaccctgaagaaggtctac
ggcgacaacgagaccatcaagtcgcttgaggatcatgagcttgtcgagctcggccgcaat
ttgagacgcggcgttccgatcgcgacgccggtgttcgatggcgccaaggaagccgatatc
gagcagatgctcgaacttgcgggcatggacaagtcaggccagtcgacggtgtatgacggg
cggaccggcgacccgttcgatcgcaaggtcacggtgggctacatctacatgctcaagctg
caccaccttgtcgatgacaagatccacgcgcgctcgattggaccttactcgctcgtcacc
cagcagccgctgggcggcaaggcgcagttcggcggccagcgtttcggcgaaatggaggtg
tgggcgctcgaggcttacggtgcggcttacacgctccaggaaatgctgacggtgaagtcg
gacgacgtcgcgggccgcaccaaggtctatgaggcgatcgtgcgcggcgacgacaccttc
gaggcgggcattccggaatcgttcaacgtgctggtcaaggaaatgcgctcactgggcctg
aatgtcgatctgcataactccaagatcggcgacatgatgccgacatccgaagcagccgag
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (53)   

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