KEGG   Nitrosococcus wardiae: E3U44_03525
Entry
E3U44_03525       CDS       T05933                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
nwr  Nitrosococcus wardiae
Pathway
nwr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    E3U44_03525 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nwr03400]
    E3U44_03525 (uvrA)
DNA repair and recombination proteins [BR:nwr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E3U44_03525 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      E3U44_03525 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 AAA_21 BCA_ABC_TP_C AAA_23 RsgA_GTPase AAA_22 AAA_25 Viral_helicase1 APS_kinase DnaJ_CXXCXGXG nSTAND3 cobW NACHT ScfRs
Other DBs
NCBI-ProteinID: QBQ53682
UniProt: A0A4P7BYU9
Position
complement(722044..724911)
AA seq 955 aa
MDRICIRGARTHNLKNIDLDLPREQLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSIMEKPDVDHIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARAGEPRC
PEHGIILEAQTISQMVDQVLSLPEGGRYMLLAPVVEGRKGEHLQVLENLLQGGFIRARID
GEVVELEQAPKLAANKKHTIEVVVDRFKIKLRPDLQLRLAESFETALQLADGLARVVSLD
DSALPEQVFSARFACPVCRYSLSELEPRLFSFNNPKGACPHCDGLGVKQFFDSSRVVLHP
ELSLAAGAVRGWDRRNTYYYQMILSLARHYGFEVETPFQDLPEVVRQVVLYGSGQEKITF
RYLSSQNKQTTHRHAFEGVIPNMERRYRETESPAVREELARYLAVQACPSCQGTRLCQEA
RHVFVADYSLPEITALPVGRALSLFSQLCLPGRRGAIASPILKEIQDRLAFLVNVGLDYL
TLNRSAETLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDHQRLLDTLTRLRDLG
NTVIVVEHDEDAIRAADHVVDMGPGAGAHGGEIIAQGTPAEIMANPASLTGQYLGGQKEI
AVPCQRRPINASRLLSLRGASGNNLRQVDLEIPLGVMTCVTGVSGSGKSTLINDTLLRVA
ARTLNRASVDPAPYEGIEGLEHLDKVVAIDQSPIGRTPRSNPATYTGFFAPVRNLFAETP
EARSRGYGPGRFSFNVKGGRCESCQGDGLIKVEMHFLPDIYVACDVCQGKRYNRETLEIR
YKGKNIYEVLEMTVEEARDFFANVPAVVRKLQTLLEVGLSYIKLGQNAVTLSGGEAQRVK
LAKELSKRDTGRTLYILDEPTTGLHFHDVAQLLQVLLRLREGGNTIVIIEHNLDVIKTAD
WIVDLGPEGGEGGGRVMAMGTPEAVAACQASYTGHYLAQLLSQANGPQPLSAAKL
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggatcggatttgcatccgcggtgcgcgtacccacaatttaaagaatattgatctggat
ttaccccgagagcagttaatcgtcattaccgggctatcgggttcggggaagtcgtctctg
gcttttgatactctttacgctgaagggcagcgccgctatgtggagtccctctcggcctat
gcccgccagtttctctctatcatggaaaagcccgatgtggatcatattgaagggctctcc
ccggccattgctattgagcaaaaatccacttcccataatccccgctccaccgtcggcacc
attaccgaaatctatgattatttacgtctgctctatgcccgcgccggtgaacctcgttgt
cccgaacatgggattatcctagaagcccagaccataagccaaatggtggatcaggttttg
agccttcctgaaggagggcgatacatgctgctggcgccggtggtggaagggcgcaaggga
gagcatctgcaagttttggaaaatttgctgcaaggggggtttatccgggcccggattgat
ggtgaggtggtagaactggagcaggcccccaagcttgcggctaataaaaagcataccatc
gaggtcgtggtggatcgttttaagatcaagcttcgtcccgatctccagctgcgtctagcg
gagtcctttgagaccgccttgcagttagccgatggcctggcccgggtggtgtccctggat
gattcggccctgccagagcaggtgttttcggcccgctttgcctgtcctgtttgccgctat
tctttaagtgagttggaaccccggttgttttcctttaataaccccaagggcgcttgtcct
cactgcgacggcttgggggtgaagcagttttttgattcttcccgggtggtgctccacccc
gagctgagtttggccgcgggcgcggtccggggttgggatcggcgcaatacctattactac
cagatgatcctttccctggcccggcattatggctttgaggtggaaacccccttccaagat
cttcccgaagtggtacgtcaggtggtgctttatggcagtggtcaggaaaaaatcaccttt
cgctacctcagcagtcaaaataagcagaccacccatcgccatgccttcgagggggtgatt
cccaatatggagcgccgttatcgggagaccgagtccccagcggtacgggaagaattagcc
cgctatttggcggtgcaggcttgcccgtcgtgccagggtacccgactgtgccaagaggcg
cgccatgtctttgtggcggattatagcctgcctgagattactgccttgcccgtgggtcgg
gcgctgagcttgttttcccaactatgtttgccaggccgccgaggcgccattgccagcccc
atactcaaggaaatccaagatcgattagcgttcctggtcaatgtagggttggattacttg
actttgaatcggagtgccgagaccctttccggtggcgaggcccaacgaatccggctggcc
agccagatcggggccggtttggtgggagtcatgtatatcctagatgaaccttccattggt
ttgcaccagcgggatcatcagcggttgctggataccttgacccgtctccgcgacctgggc
aataccgttattgtggtggaacacgatgaagacgccatccgggcggctgaccatgtggtg
gatatgggccccggtgccggggcccatgggggagagatcatcgcccaaggtacgccggcg
gagatcatggccaatccggcctccctgaccgggcagtatctgggggggcagaaagagatt
gctgtgccttgccagcgcaggcctatcaatgcctcccggctgctttctttgcggggggcc
agtggcaataacttacgtcaggtggatttggaaattcccctgggggtcatgacctgcgtc
acgggggtttctggttccggtaagtctaccttaatcaacgatactttgttacgggttgcc
gcccggaccctcaatcgggcctcggttgatcctgccccctatgaaggaatcgagggtttg
gagcacctggataaagtggttgctattgaccaaagccctattggtcgtacccctcgctct
aacccagccacctataccggcttctttgcccctgtgcgcaatttattcgcggaaacccct
gaggcccgctcccggggttatgggccggggcgtttcagctttaatgtcaaaggggggcgc
tgcgaatcctgccagggggacggcctgatcaaagtagaaatgcactttcttcctgatatc
tatgtggcttgcgatgtctgccagggcaagcgctataaccgggaaactctagagatccgc
tataagggcaaaaatatttatgaagtcttggagatgacggtggaggaagcgcgggatttt
tttgccaatgtcccggcggtggtccgaaagctgcaaaccttgctggaggtgggactgtcc
tatatcaagctagggcagaatgcagtgactctctctggtggcgaagcccaacgggtcaaa
ttggcgaaagaactgtccaagcgggacacgggtcggaccctatatattctggacgaaccc
accaccggattgcacttccatgatgtggcccaacttcttcaagtgttactacggctgcga
gaaggggggaataccattgtgatcatcgagcacaatttggatgtaatcaagactgctgac
tggattgtagacttgggccctgaggggggcgagggcggtgggagggttatggctatggga
acgcctgaggcggtggccgcctgccaagcttcctataccggacattacttagcccagctc
ctatctcaggccaatggtcctcaacccttgtcagcagcgaaattatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (27)   

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