KEGG   Nitrosococcus wardiae: E3U44_09430
Entry
E3U44_09430       CDS       T05933                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
nwr  Nitrosococcus wardiae
Pathway
nwr00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    E3U44_09430 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:nwr01007]
    E3U44_09430 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nwr03016]
    E3U44_09430 (lysS)
Enzymes [BR:nwr01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     E3U44_09430 (lysS)
Amino acid related enzymes [BR:nwr01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   E3U44_09430 (lysS)
Transfer RNA biogenesis [BR:nwr03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    E3U44_09430 (lysS)
 Prokaryotic type
   Other AARSs
    E3U44_09430 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: QBQ54703
UniProt: A0A4P7BX58
Position
1933061..1934563
AA seq 500 aa
MVKQEESELIAQRRAKLAELRARENPFPNNFRRNVMAGELQAEYHHRSAEELEKRPLRVK
VAGRMMTQRIMGKASFAHIQDMSGRIQLYIRRDHLPEEGYREFKRWDIGDIVGAEGVLMK
TNSGELSVRVDGLRLLTKSLRPLPEKFHGLADQETRYRQRYLDLIMNEVTRETFRRRSYI
IDRIRRYLGDRGFLEVETPMMQAIPGGAVARPFITYHNTLDMELFLRIAPELYLKRLVVG
GFEKVFEINRNFRNEGLSARHNPEFTMLEFYQAYATYEDLMDLTEAMMRDLAQTVLGSTE
ITYQGETYDFGSPFTRMSLKESILYFNPDIPPADLETLPLARRIAEHLDIPLRESYGLGK
IQLEIFEKTVESRLKNPTFITAYPTEVSPLARRNETDPLVADRFEFFVGGWEIANGFSEL
NDAEDQAERFRAQLQDREAGDQEAMHFDMDYIQALEYGMPPTAGEGIGIDRLVMLLTDSP
SIRDVLLFPHMRPREKLAKS
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggttaaacaggaagagagcgagctgattgcccagcggcgggcaaaattggctgaactt
cgtgcgcgggagaatccctttcccaataattttcggcgcaatgtgatggccggtgaactg
caggcggaatatcaccatagaagtgcagaggaactagagaaacggcccttgcgagtcaaa
gtggctggccgcatgatgacccagcggattatggggaaggcaagctttgcccatattcag
gacatgtcggggcgaattcagctttatatccgtcgcgatcacctaccggaagaaggttat
cgggaattcaaacgttgggatattggggatattgtgggagccgaaggtgtgctcatgaag
accaatagcggtgagctttccgtccgggtcgatgggttgcggttgttaaccaaatcctta
cgtcctttgcctgagaaatttcatggcttggcggaccaagaaacccgttatcgacagcgt
tatcttgatctcatcatgaatgaggtgacccgagaaacttttcgtcggcgtagttatatt
atcgatcggattcggcgttatttaggggatagggggtttctcgaagtggaaacgcctatg
atgcaggctattcccggtggcgctgtggctcggccttttattacctatcacaatacgctg
gatatggagctgtttttacggatcgctccagaactctatcttaagcgcctcgtggtaggg
ggctttgaaaaggtgtttgagattaatcgtaattttcggaacgaggggctttccgcccgc
cataatccggaatttacgatgctggagttctatcaggcctatgccacctatgaggatctg
atggatctcaccgaggctatgatgagggatttggcgcagacggtactcggctcgaccgaa
attacctatcagggcgaaacctatgattttggcagcccttttacccggatgagtctcaaa
gagtccattctctatttcaatcccgatattccccccgcggatttggaaacccttcccctg
gcccgtcgcatagccgagcatcttgacattccccttcgagaaagttatggcttgggcaag
atacagcttgagatctttgagaagaccgtggagtctagacttaaaaacccaacttttatc
actgcttatcctacagaggtttcgcctttggcgcggcgcaatgaaacggatcccttggta
gccgatcgattcgaattttttgttggcgggtgggaaatcgccaatggcttttctgagttg
aatgatgccgaagaccaggccgagcgtttccgggcccaattacaagaccgggaggccggc
gaccaggaggcgatgcattttgatatggattatattcaggccttggaatatggtatgccg
cccacggcgggagagggtattggtatcgaccgcctggtgatgttattgaccgactctcct
tctatccgtgatgtcttgttatttcctcatatgcggccgcgggagaagttagcaaagtcc
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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