KEGG   Strawberry lethal yellows phytoplasma (CPA): SLY_0310
Entry
SLY_0310          CDS       T02674                                 
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
nzs  Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nzs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SLY_0310 (ung)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nzs03400]
    SLY_0310 (ung)
Enzymes [BR:nzs01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     SLY_0310 (ung)
DNA repair and recombination proteins [BR:nzs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SLY_0310 (ung)
 Prokaryotic type
     SLY_0310 (ung)
SSDB
Motif
Pfam: UDG DndE
Other DBs
NCBI-ProteinID: AGL90232
UniProt: R4RWI4
Position
complement(257672..258316)
AA seq 214 aa
MWKKIIDLQRKKDYFQNIAQFLKAEKMKNKVIYPETKDIFTAFHLTAFHKVKAVILGQDP
YHGENQAHGLSFSVKGQKRPPTLNNIFKELKNDLNIESHQNNLTPWALEGVLMLNSILTV
QKNKPLSHQNIGWQTFTQIILESLQTKKNVVYLLWGKFAQTYEKYIISQNNYIIKSPHPS
PFSAANGFFGSKHFSKTNLYLKSHNIQEINWQLH
NT seq 645 nt   +upstreamnt  +downstreamnt
atgtggaaaaaaattattgatttacaaagaaaaaaagattattttcaaaatatagctcaa
tttttaaaagcagaaaaaatgaaaaataaagttatttaccctgagacaaaagacattttt
acagcctttcatctaaccgcttttcataaagtaaaagcagtaattttaggacaagaccct
tatcatggcgaaaaccaagcacatggtttatcttttagcgtgaaagggcaaaaacgtccc
ccaacccttaataatatttttaaagaattaaaaaatgatttaaacattgaaagccatcaa
aataatttaaccccttgggctttagaaggagttttaatgttgaattctattttaactgtt
caaaaaaataaacctttgagtcatcaaaacattggttggcaaacttttactcaaattatt
ttagaaagcttgcaaacgaaaaaaaatgtagtttatcttttgtggggtaaatttgctcaa
acttatgaaaaatacattatttctcaaaataattacattatcaaaagccctcatccttcc
cccttttctgctgctaacggtttttttggctctaaacatttttccaaaactaacctttac
cttaaatcacacaatatccaagaaattaattggcagcttcactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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