KEGG   Strawberry lethal yellows phytoplasma (CPA): SLY_0697
Entry
SLY_0697          CDS       T02674                                 
Symbol
ihfA
Name
(GenBank) Hypothetical Protein ihfA
  KO
K03530  DNA-binding protein HU-beta
Organism
nzs  Strawberry lethal yellows phytoplasma (CPA)
Brite
KEGG Orthology (KO) [BR:nzs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nzs03032]
    SLY_0697 (ihfA)
   03036 Chromosome and associated proteins [BR:nzs03036]
    SLY_0697 (ihfA)
   03400 DNA repair and recombination proteins [BR:nzs03400]
    SLY_0697 (ihfA)
DNA replication proteins [BR:nzs03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SLY_0697 (ihfA)
Chromosome and associated proteins [BR:nzs03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SLY_0697 (ihfA)
DNA repair and recombination proteins [BR:nzs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SLY_0697 (ihfA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_1 Topoisom_I_N
Other DBs
NCBI-ProteinID: AGL90612
UniProt: R4RXI6
Position
597936..598274
AA seq 112 aa
MEQSIKKYKQKKETLKMTKKELITTLAKVTKNSVTQTEKFYNSFENTLIEAITSNEEVVL
SPQLGRFVLKTRQARLGRNPKTGKKIKIPAKTAVTFKISSNLKDKVKNIELD
NT seq 339 nt   +upstreamnt  +downstreamnt
atggaacaatcaataaaaaaatataaacaaaaaaaggagacactaaaaatgactaaaaaa
gaattaattacaacacttgcaaaagtaactaaaaattcagttacccaaactgagaaattt
tacaattcctttgaaaacaccttaattgaagcaataacttccaacgaagaggtagttttg
tcaccccaacttggaagatttgttttaaaaacccgacaagctcgtttaggaagaaacccc
aaaacaggtaaaaaaataaaaatccctgctaaaacggctgtgacttttaaaatatcatca
aaccttaaagataaagtcaaaaacattgaattagattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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