KEGG T01045: 100081372

Ornithorhynchus anatinus (platypus): 100081372

Entry

100081372         CDS       T01045

Symbol

SOX13

Name

(RefSeq) transcription factor SOX-13 isoform X1

K09269

transcription factor SOX5/6/13 (SOX group D)

Organism

oaa Ornithorhynchus anatinus (platypus)

Brite

KEGG Orthology (KO) [BR:oaa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oaa03000]
    100081372 (SOX13)
Transcription factors [BR:oaa03000]
Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    100081372 (SOX13)

SSDB

Motif

Pfam:

HMG_box HMG_WDHD1 HMG_box_2 TFIIA

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

7:60341921..60356232

AA seq 615 aa
MSMRSPVSPHLALDGVGTMVNCTIKTEEKKEIRPEALLVPTPGTEPHPGDPPRAPRDGNE
PRASAQECRSPGSDGPPEPRRPAPELATGSQEKLDFNRNLKDVMPTIEKLLSSDWKERLL
GRNTLETKEVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPESQLA
LPIQPIPCKPVEYPLQLLHSPPAPAVKRTSGAVSAHHSLQEPSQPLNLTAKPKGPELPNT
SSSPSLKLSGCGPLPSSHGGPTRDLQSSPPSLPLGFLGEGDAITKAIQDARQLLHGHSGA
MESAPSHPYRKDLLSLDSSPLKDRLEENCGPPLDEAMLSCDMDGSRHFPESRNNNHIKRP
MNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEK
YPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQSYLITPPGGPMPLGSPEVLYP
RAAGVPLAQPLLDPYLPRGLDPSMPVIVNTRSLKEEGDGPEDGHSVAEGEMYRYSEDSDS
EGEDKSDGELVVLTD

NT seq 1848 nt +upstreamnt +downstreamnt
atgtccatgaggagtcctgtctctccacacctggcgctcgatggcgtgggcactatggtg
aactgcaccatcaagacggaggagaagaaggagatccgcccagaggctcttctggtgcct
acccctggcacggagccccatcccggagaccctccccgagcgccccgagatggcaacgag
ccccgagcctcagcacaggagtgcaggtcccccgggagcgacgggcctccagaacccagg
agaccggccccagagctggccactgggagccaggagaagctggacttcaacaggaattta
aaagatgttatgccgaccattgagaagcttctctccagtgactggaaggagagactgctg
ggaaggaacactttggaaaccaaagaggtcaaaggaacccaggagagtctggcagagaag
gaacttcaactcctggtcatgattcaccagctgtccaccctgcgggaccagctgctgaca
gcccattcggagcagaagaacatggcggccatgttgtttgagaagcagcagcagcagatg
gaattggccaggcagcagcaggagcagatcgctaagcaacagcagcaactcatccagcaa
cagcacaagatcaaccttcttcagcagcagatccagcaggtcaacatgccatacgtcatg
attcctgccttccctccgagccaccagcccctgcccgtcacccccgagtcccaactggca
ctgcccatccaacccatcccatgcaagccagtggagtatccactccagcttctgcacagc
cctccggcccctgcggtgaagaggacctccggagccgtctcagcccaccactccctgcag
gagccctctcagccgctcaacctgacagcgaaacccaaaggccccgagctgcccaacacc
tccagctccccaagcctgaagctgagtggctgcggccccctcccttccagccatgggggc
cctacccgggacctgcagtccagcccacccagtctgcccctggggttcctgggggagggt
gatgccatcaccaaggccatccaggatgcccgccagctgctgcatgggcacagtggagcc
atggagagtgcccccagccacccctacaggaaggacctcctcagtctggactcgtccccg
ctcaaggaccgactggaggagaactgtgggcctccgctggatgaggccatgctgagctgt
gacatggacggctcccgccacttccccgagtccaggaacaacaaccacatcaagcggccc
atgaatgccttcatggtgtgggccaaggatgagaggaggaaaatcctccaggccttccca
gacatgcacaattccagcatcagcaagatcctgggctcccgctggaagtccatgacgaac
caggagaagcagccgtactacgaggagcaggcgcggctgagccggcagcacctggagaaa
tatcccgactacaagtacaagccccggcccaagcgtacctgcatcgtggagggcaagcgg
ctccgggtgggcgagtacaaggccctgatgaggaaccggcgccaggatgcccgccagagc
tacctgatcaccccaccagggggcccgatgcccctcggctctccagaagtcctgtacccg
cgggcggcgggcgtgcccctggcccagcctctgctggacccctatctgcctcggggcctg
gacccgagcatgcccgtcatcgtcaacacccgcagcctcaaggaggaaggggacgggccg
gaggacggacactccgtggccgaaggcgagatgtaccggtacagcgaggactcggactcg
gagggtgaagacaagagcgatggggaattggtggtcctcacggactga

All links

Gene (20)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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