KEGG   Ornithorhynchus anatinus (platypus): 100082461
Entry
100082461         CDS       T01045                                 
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X2
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
oaa  Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oaa03021]
    100082461 (CHD1)
   03036 Chromosome and associated proteins [BR:oaa03036]
    100082461 (CHD1)
Transcription machinery [BR:oaa03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     100082461 (CHD1)
Chromosome and associated proteins [BR:oaa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     100082461 (CHD1)
    SLIK complex
     100082461 (CHD1)
SSDB
Motif
Pfam: SNF2-rel_dom CDH1_2_SANT_HL1 CHD1-like_C Helicase_C Chromo HDA2-3 ResIII
Other DBs
NCBI-GeneID: 100082461
NCBI-ProteinID: XP_028913613
Ensembl: ENSOANG00000004891
Position
1:9123474..9194045
AA seq 1806 aa
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGT
RSDTESDASRDKKQVQAKPPKVDGAEFWKSSPSILAVQRSAMLRKQQQQQQQQASSNSGS
EEDSSSSEDSEDDDSSEVKRKKHKDEDWQMSGSGSPSQTGSDSESEEEREKSSCEESESD
YEPKNKVKSRKPQNRIKAKNGKKISGQKKRQIDSSDEDDDDDDDDDYDKRGSRRQATVNV
SYKEDEEMKTDSDDLLEVCGEDVPQPEEDEFETIERFMDSRIGRKGATGATTTIYAVEAD
GDPNAGYEKSKESGETQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETK
RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE
CSWEDGALISKKFQPCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLE
LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS
TLTSWQREIQTWAPQMNAVVYLGDVNSRNMIRTHEWMHLQTKRLKFNILLTTYEILLKDK
AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI
MPEKFASWEEFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSA
LQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL
QHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKG
ELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR
IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPF
NKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFK
VANFSNMDEDDIDIEPERNSRNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI
SFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKK
FGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGQERTGGRLGKVKGP
TFRISGVQVNAKLVISHEEELVPLHKSIPSDPEERKRYTIPCHTKAAHFDIDWGKEDDSN
LLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARK
EAQRLSGAGNSKRRKTRTKKSKLGKSAKVKEAVKSDSSPLPSEKSDEDEKDEITCVKHPN
KKSKTEKESEEKPEPEVGVKKEPEEKREAKEKENKRELKREKKEKEDKKDIKEKDIKEKR
ENKVKEAMQKEKDMKEEKISETKSDNKEKSKKSAALDAPVHITASGEPVPISEESEELDQ
KTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYANPEQI
KQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNSGSTMNTHVIRNPDVER
LKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKGDSRKRPYSSFSNGKDHRDWD
HYKPESRYYSDSKHRKLDDHRSRDHRSSLEGSLKDRSHSDHRSHSDHRLHSDHRSSCDYS
HHKSSRDYRYHSDWQMDHRASGSGPRSPLEQRSPYGSRSPLGHKCPFEHSSDHKSTPEHT
WSSRKT
NT seq 5421 nt   +upstreamnt  +downstreamnt
atgaatggacacagcgatgaagaaagtgtcagaaacagcagcggagaatcaagccagtcg
gacgatgactccggatcagcatccggatctggatcgggttcgagctccggaagcagcagc
gatggaagcagcagtcagtcaggcagcagtgactccgattccgggtccgagtcgggcact
cgctcggataccgagtcggacgcttccagagacaagaaacaagtgcaagctaaaccaccg
aaagtcgatggagccgagttttggaagtccagtcctagtattctggccgttcagagatcc
gcaatgctcagaaagcagcagcagcaacaacaacagcaagcttcatcaaacagtggatca
gaagaggattcatcaagcagtgaagattccgaggatgatgattctagtgaagtcaagagg
aagaaacacaaagatgaagactggcaaatgtctgggtcaggttctccctctcagacggga
tcagactcagaatcagaggaagagagagagaaaagcagttgtgaagaaagtgaatctgac
tatgagccaaaaaacaaagttaagagcaggaaacctcagaacagaataaaagcgaagaac
ggaaagaagatatctgggcagaagaaaaggcagatcgattcttcggatgaggatgacgat
gatgacgacgacgatgattatgataaaagagggtctcgtcgccaggccaccgtcaatgtt
agctataaggaagatgaagaaatgaaaacagattcggatgacttgttggaagtctgcggg
gaagacgttcctcaaccggaagaggatgaatttgaaacgatagagaggtttatggacagt
cggattggacgaaaaggagcaacgggtgccaccacgacgatatacgcggtcgaagcagac
ggcgatccgaacgcaggctacgaaaaatcgaaggaatccggagagacccagtatttaatt
aaatggaaaggctggtctcatatccacaatacttgggagaccgaagaaaccttaaagcag
cagaatgttaaagggatgaaaaaattagacaattacaagaaaaaggatcaggaaaccaaa
agatggttgaaaaatgcttctccagaagatgtggaatattataattgccagcaagaacta
acagatgatttacataaacagtatcaaatcgtggagagaataattgcccattcaaaccag
aagtcagcagcgggctatccagattactattgcaaatggcagggcctgccgtactccgag
tgcagttgggaagacggagcactcatttccaaaaagtttcagccatgcatcgatgaatat
ttcagcagaaatcaatctaagaccactccgttcaaagattgcaaagttttaaaacaaagg
ccaagatttgttgcactgaagaaacagccatcctatattggagggcatgaaggtttagaa
ctaagggattatcaattaaatggtctgaattggctcgcccattcatggtgcaaagggaac
agctgcatacttgctgatgaaatgggccttggcaaaactatacagactatatccttttta
aattacctgttccatgaacaccagttatatggacctttcttattagtcgtgccactttct
actcttacttcttggcaaagagaaattcaaacctgggctcctcagatgaatgccgtggtt
tacttaggggacgttaacagcagaaacatgataagaactcatgaatggatgcacctccag
accaagcgtctaaagtttaatatacttttgacaacctatgaaattttgttgaaggataag
gcattcctaggtggcctgaattgggctttcataggtgtggatgaagctcatcgtttaaag
aatgacgactcacttctgtacaagactttaatagacttcaaatccaatcaccgccttctt
atcactggaacacccctgcaaaattccctcaaagagctgtggtctttgctgcacttcatc
atgcccgaaaaatttgcctcctgggaagaatttgaagaggaacacggcaaagggagggaa
tatggctatgccagtcttcacaaagagcttgagccctttttactgcgcagagttaagaaa
gacgtcgaaaaatctcttcctgccaaggttgaacagattttaagaatggagatgagtgca
ttgcagaagcaatattacaaatggattttaacccggaattataaagccctcagcaaaggt
tcgaagggcagtacctcaggctttttgaacatcatgatggagctcaagaagtgttgtaac
cattgctacctcattaaaccacctgataataatgaattctataacaaacaggaggcctta
cagcatttaatccgaagcagcggaaaattgattcttctcgacaagcttttgattcgctta
agagaaagaggcaacagagttcttattttctctcagatggtgcggatgttagatattctt
gcggaatatttgaaatatcgtcagttcccctttcagagactagatggttcaatcaaagga
gaactgaggaaacaagcactagatcattttaatgccgaaggatcagaggatttctgcttt
ttattatctacaagagctggaggtttaggaattaatctagcatccgctgacaccgttgtt
atatttgattctgactggaacccgcaaaatgatcttcaggcacaggctagagctcataga
attggacaaaagaaacaggtcaatatctatcggctagtcaccaagggttcggttgaagaa
gatatccttgagcgagccaagaagaagatggtgctggatcatctagtaattcagagaatg
gacacgaccgggaagactgtgctccacacaggctccactccctcaagttctactcctttc
aacaaggaagagttatctgcaattttaaagtttggcgcagaagaactttttaaggaaccc
gaaggtgaagaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaa
actcatgaaaatgaaccaggtccactgactgtaggagatgaactgctttcccagttcaag
gtggccaatttttcaaatatggatgaagatgacatagatatagaacctgaaagaaattca
aggaactgggaggaaatcattccagaagatcaaagacggaggttagaagaggaagaaaga
caaaaagagcttgaagaaatctatatgctcccaagaatgagaaattgtgcgaagcagatc
agcttcaacggaagcgaaggcaggcgcagtagaagcagaagatactctggctcagacagt
gattcaatctctgaaaggaaaaggccaaaaaagcgaggaagaccccgaactatcccacgg
gagaatattaaaggatttagtgatgcagaaattaggcggtttatcaagagttacaagaaa
tttggtggtcctctggaaaggttagatgccattgctcgagatgccgagttagttgataaa
tcagagacagatctcagaagattaggggaacttgttcataatggatgcatcaaggcttta
aaggacagttcttctggacaggaacgaacaggaggtcgacttgggaaagtgaaaggtcca
acattccgaatatcaggagtacaggtgaatgcaaaacttgtcatctctcatgaagaggaa
ttagtaccgctgcacaagtccattccttcagatccagaggaaagaaaaaggtataccatc
ccttgccacaccaaagcagctcacttcgatatagactggggcaaagaagatgattccaac
cttttaattggcatctatgaatatggttatggaagctgggaaatgattaaaatggatcct
gatctcagcttaacccataagattctacctgatgatccggataaaaaaccacaagcaaag
caattgcagactcgagcggactacctcattaaattattaaataaagatcttgcaagaaaa
gaagcccagagactttctggtgccggcaactcaaagagaaggaaaacaaggacaaagaag
agtaaactggggaaatctgccaaagtgaaagaggcagtaaagagtgattcttctccgcta
ccctcagaaaaatccgacgaggacgaaaaggatgaaatcacttgtgtgaaacatccaaat
aaaaaaagtaagacagaaaaagaaagcgaagaaaaacctgagccagaagttggtgttaag
aaggagccagaagaaaagagggaagcaaaagaaaaggaaaataagagagaacttaaaagg
gagaaaaaagaaaaggaggataaaaaggatataaaggaaaaggatattaaagaaaaaaga
gaaaacaaagtaaaagaagctatgcagaaagagaaagacatgaaggaagaaaagataagt
gaaaccaaatctgataacaaagagaaatctaagaaatctgcagcattagatgctccagtt
catatcactgcaagcggagagcccgttcctatatcggaagaatctgaagagctggatcag
aaaacattcagtgtttgcaaagaaagaatgaggcctgtcaaagcagccctgaagcagctt
gatcgacccgagaaaggcctttccgagcgagaacagctggaacataccagacagtgtctg
atcaaaatcggggatcacattactgagtgtctcaaagaatatgcaaaccctgaacaaatt
aagcagtggagaaaaaatttatggattttcgtctccaagtttacagaatttgatgcaagg
aaactgcacaaattatacaagcacgctattaaaaagcgacaggaatctcagcaacataat
gaccagaacagcggcagtaccatgaatactcacgtgattagaaatccagatgtggaaaga
ctgaaagagaatacgaatcacgatgacagcagcagggacagttattcttccgatagacat
ctgtcacaatatcacgatcaccataaagatcggcatcaaggagatgcttacaagaaaggc
gattcccggaaaaggccctattcttccttcagcaacggaaaagaccaccgggattgggat
cactacaaaccagaaagcagatactacagcgatagcaaacaccgaaaactggacgatcac
aggagtcgagatcacaggtcgagcctggaaggaagtttaaaagacagatcccattccgac
caccgttcccattcagaccatcgattgcactcggaccaccgatcgagttgtgactactcc
caccacaaatcttcccgggactatcgctaccactcagactggcagatggaccacagagct
tccggtagcggcccccgatcgcccctagaacagaggtccccgtacggctccagatcgccc
ttgggccataagtgtccgttcgaacactcgtccgatcacaaaagcacgccggagcatact
tggagcagtcggaaaacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (64)   

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