KEGG   Ornithorhynchus anatinus (platypus): 100084904
Entry
100084904         CDS       T01045                                 
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
  KO
K14318  nuclear pore complex protein Nup88
Organism
oaa  Ornithorhynchus anatinus (platypus)
Pathway
oaa03013  Nucleocytoplasmic transport
oaa05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100084904 (NUP88)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100084904 (NUP88)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oaa03019]
    100084904 (NUP88)
Messenger RNA biogenesis [BR:oaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100084904 (NUP88)
SSDB
Motif
Pfam: Nup88 DUF659
Other DBs
NCBI-GeneID: 100084904
NCBI-ProteinID: XP_028938237
Ensembl: ENSOANG00000037123
Position
17:1412234..1425938
AA seq 731 aa
MAAPEATGLEGEAWRAWLPQHAVFLRLRDGLKAAAPPRKAPLTRNLLFGLGAELFLWERD
GGAFLTVRLRGLAAAVAAQPASLSRYQRLLCINPPVFEVYQVLLSPTQHHVALIGTKGLM
VLELPKRWGKNSEFEGGKSTVNCSTTPIAERLFTSSTSLTLKHAAWYPGETADPHIVLLT
SDNTIRIYSLREPQSPTKVILLSDTEEDNFQLSKGRAYTASLGETAVAFDFGPLAAVPKN
ASGQLGRDEVLAHPLYILYENGETFLTYVSLRQSTGSLGKPLGPLPMHPAAEDNYGYDAC
AILCLPCVPNILVIATEAGMLYHCVVLEGEDGDDQTSEKSWDSRSDPIPSLYVFECVELE
LALKLAAGEDDDDPFESDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLTWIHRLNKFLGS
DEEDKDSLQALATDQKCFVEHILCTKPLPCRQPAPVQGFWIVSDILGPTMICVTSTYECL
TRPLLSTVHPASPPLLCTREDGEVAESPLRLLADPQDSFEKRIRTILRRSVANPAFLRSS
AKDEAPPPAECLQLLSRATQVFREEYILKQDLAREEIQRRVKLLCGQKKKQLEDLSYCRE
ERKSLRETAERLADKYEEAKEKQEDIMNRMKKVLHNFHCQLPVLSDSERDMKKELQLVLD
QLRHLGNAIKQVTMKKDYQQHKMGKGLSPHKATITLSAYQRQCIQTVLKEAGEHIREMVK
QINDVRSHVTF
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggcggcgcctgaggcgacggggctggagggggaggcctggcgggcctggctgccgcag
cacgccgtcttcctgcgcctccgcgacgggctgaaggcggccgccccgccgcggaaggcg
ccgctgacgaggaacctgctgttcgggctgggcgccgagctgttcctctgggagcgggac
ggcggcgccttcctgaccgtccgtctgcggggcctggccgccgccgtcgccgcccagccc
gcctcgctttcccgctaccagcgcctgctttgtataaacccgccggtgtttgaagtctac
caagtcctgctgagccccacccagcaccacgtagccctcatagggaccaaggggctcatg
gtgttggagctgcccaagcgctggggaaagaactccgagttcgaaggcggcaaatcgaca
gtgaactgcagcaccacccccatcgccgagaggcttttcaccagctccacctccctgact
ctgaagcacgcggcctggtacccgggagagacggccgacccccacatcgtgctcctgacg
tccgacaacacgatccgaatttacagcctgcgggaaccccagagccccaccaaagtgatc
ctgctgtccgacaccgaggaggacaacttccagctcagtaaaggaagggcgtacaccgcg
tccctcggagagacggccgtggcgttcgacttcgggccgctggcggccgtgccgaagaac
gcgtcggggcagctcgggcgagacgaggtgctggcacatccgctgtacatcctgtacgag
aacggcgagaccttcctcacctacgtcagcctgcggcagagcaccgggagcctggggaag
ccgctgggccccctgccgatgcaccccgccgccgaggacaactacggctatgacgcctgc
gccatcctctgcctgccctgcgtccccaacatcctggtcatcgccaccgaggcggggatg
ctctaccactgcgtggttctggaaggggaagacggggatgatcagacgtcggagaagtcg
tgggactcgaggtccgaccccattccatccctctacgtgttcgagtgcgtcgagttggaa
ctcgccctgaaactggcggcgggagaagacgacgacgacccgttcgagtcggatttttcc
tgccccattaagctccacagagaccccaaatgcccgtccaggtaccactgcacccacgaa
gccggcgtccacagcgtcggcctgacgtggatccacagactgaacaagttcctcggctcc
gacgaggaagacaaggacagcctgcaggccctggctaccgatcagaagtgtttcgtggag
cacatcctgtgcactaagccgctgccctgcaggcagccagcgcccgtccaaggattctgg
atcgtctccgacatcctggggcccacgatgatctgcgtgaccagcacctacgagtgcctc
acacgaccgctcctgagcacggtccacccggcctcccccccgctcctctgcaccagggag
gacggggaggtggcggagtcgcccctgcgactactggccgacccccaggactccttcgag
aagcgcatccggaccatcttgcggcgcagcgtcgccaatccggccttcctgaggtcttcc
gctaaggacgaggctccccctcccgcagaatgtctccagctactcagccgggccacgcag
gtcttcagggaagagtacatcctgaagcaggacctggccagggaggagatccagcgcagg
gtgaagctgctgtgcggacagaagaagaaacaactggaagatctgagttactgtcgggag
gaaaggaagagcctgcgggagacggccgagcggctggccgacaagtacgaggaggccaaa
gagaagcaggaagacatcatgaacaggatgaaaaaagtgctccacaacttccactgtcag
ctgccggtgctgtcggacagcgagcgggacatgaagaaagaactgcagctggtcctagat
cagctgcggcacctgggcaacgccatcaaacaggtgaccatgaagaaggactatcagcag
cacaagatggggaaggggctgagtccccacaaagccaccatcacgctcagcgcctaccag
cgccagtgcatccagaccgtgctcaaagaggcgggcgagcacatcagggagatggtcaag
caaatcaacgacgtcagaagccacgtgaccttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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