KEGG   Oscillatoria acuminata: Oscil6304_5134
Entry
Oscil6304_5134    CDS       T02368                                 
Name
(GenBank) type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
oac  Oscillatoria acuminata
Brite
KEGG Orthology (KO) [BR:oac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oac03032]
    Oscil6304_5134
   03400 DNA repair and recombination proteins [BR:oac03400]
    Oscil6304_5134
Enzymes [BR:oac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Oscil6304_5134
DNA replication proteins [BR:oac03032]
 Prokaryotic type
  DNA Topoisomerases
   Oscil6304_5134
DNA repair and recombination proteins [BR:oac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Oscil6304_5134
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: AFY84636
UniProt: K9TR34
Position
6547280..6549880
AA seq 866 aa
MAKQLNLLSTGQVIPTALHVEMQQSYLEYAMSVIVGRALPDVRDGLKPVHRRIMYAMHEL
GLSPDRPYRKCARVVGDVLGKYHPHGDQSVYDAMVRMIQEFSSRYPLLAGHGNFGSVDND
PPAAMRYTETRLAEIGSDAMLQEIGEATVDFIGNFDNSQQEPIVLPAQLPMLVLNGSSGI
AVGMATNVPPHNLGEVVDALIALIDNPDLSDEKLFTLIPGPDFPTGGEIIDTEGIRSAYT
TGRGIIPLRGVARVEEIQGGRGKHRRQAIVVTELPYQVNKSAWIEKIADLVNHGRLDGIS
DLRDESDRDGIRVVIELKRETNPEVVLQHLYHQTALQNNFGAILLALVEAQPRQLSLRQM
LQEFLTFREQTLNRLYTHELERTQQRLEIVEGLLKALNNLDALIEILRNAPDGTTAKVEL
QSELELTENQADAILGMPMRRITGLERQKLQDERDQLNTRRLELERLLGDRRELLKGLKK
ELRSLKKKYADPRRTRIYTVSPDRETVLVATPDSGEETSKTKSRKGKKAAIPEEVAPSLP
LFATPPEPEETVLEFTRRGYVQRLSPSAYERQQQKQEENPEIQTLEAGADFVVETHVAFT
DQDVLILTRDGKGFSIKVGDIPANKRGAKKTPFVSLFPPAVHGNPDAIATQFILSDYPET
LDLIFLTERGRIKRLPLSEFANLTARGLTAVKLKEGDALAYANLATVGQDIAIATSGGRL
LRFAIDDDNLPITSRASMPQQALRLGKGENLVGCVALSQSEKLLLVTKLGYGKRLPVELV
RLAKPGDLGTQSMTFKNKTDGLVGMVAALPDAELKLLTSSDRFLRLPVKSVRSKRKDDAG
DRLLKLEPKETLIYLSVSSPEPEQYV
NT seq 2601 nt   +upstreamnt  +downstreamnt
atggctaaacaattgaacctactgtctactggacaggttatcccgactgctttgcacgtc
gaaatgcaacagtcctaccttgaatatgccatgagtgtgatcgtggggagggcgttaccg
gatgtccgagatggcttaaaacccgtccatcggcggattatgtacgcgatgcatgaattg
ggattatctcccgatcgcccttatcggaaatgtgctcgcgtggttggggatgtcctgggt
aaatatcacccccacggcgatcaatccgtttatgacgcgatggtgcggatgatccaggaa
ttttccagtcggtatcccctcctcgcgggtcatggcaattttggttcggtagataacgac
cccccagcggcaatgcgttacacggaaacgcgccttgccgaaattggcagcgatgccatg
cttcaggaaatcggtgaagcgacggtggattttatcggaaatttcgataattcccaacaa
gaacccatcgttttaccagcacaattacccatgctggtgctcaatggcagttcaggaatt
gccgtgggtatggcaaccaatgtccctccccacaatttaggggaggtggtggatgcattg
attgctttgattgataacccggatttatccgatgagaaattatttaccctcattcccggt
cccgatttccctaccggcggggaaattattgacaccgaaggcattcgatccgcttacacc
acgggacggggaattatccccttgcgcggggtggcaagggtggaggaaatccagggggga
cggggtaaacatcggcgtcaggcgatcgtggtgacggagttaccctatcaggtgaataaa
tccgcctggattgaaaaaatcgcggatttagtcaatcatgggcgcttagatggaatttcg
gatcttcgtgacgagagcgatcgcgatgggattcgtgttgtcatcgaactcaaacgggaa
accaatcccgaagtggttctgcaacatctctaccaccaaactgcactgcaaaataacttc
ggtgcgattctgttggcattggtagaggcacaaccgcgccagttatccctccggcaaatg
ttgcaggagttcctaactttccgggaacagacgctcaatcgtctctacacccacgaactg
gaacgcactcagcagcgtttggaaattgtcgaaggattactcaaggcgctgaacaattta
gatgcactcatcgagattttgcgaaatgcgccggatggcacgacggcaaaagtagagtta
caaagcgagttagaactcactgagaaccaagcagatgccattttagggatgccaatgcgc
cggattaccggattggaacggcaaaaattgcaggatgaacgggatcaactgaatacccgt
agactggagttggagagattactcggcgatcgccgggaattgctcaaagggttgaagaaa
gagttgcgatcgctcaaaaagaaatatgccgaccctaggcggacccggatttacaccgtt
tcgcccgatcgcgagacagtgctggtagcaactcctgactccggggaagaaaccagcaaa
actaaatcccgcaaaggcaaaaaggcagcaattcccgaagaagttgctccttctctaccc
ctgtttgccacgcctccagaaccggaagaaacagtcctggaatttactcgacgcgggtat
gtgcaacggttatccccctccgcttatgagcgtcagcaacagaaacaggaggaaaatccc
gagattcaaaccctagaagcgggggcggattttgtggtagaaacccatgttgcctttacg
gatcaagatgtgctgattttgacccgggatggcaagggattctcgattaaagttggggat
attccagcgaataaacgaggggcgaaaaaaacgccattcgtgagtttgtttcctcccgca
gtgcatgggaatccggatgcgatcgccactcaatttatcctctccgattatcccgaaact
ctggatttaatcttcttgacggaacggggaagaattaaacgcttaccgctgtcagaattt
gctaatttgacggcaagaggattaacagcagttaaactaaaagagggagatgcgttagct
tatgccaatttagcgacagtgggacaagatattgcgatcgccacctccgggggacgatta
ctccgatttgcgatcgatgatgacaacctccccatcaccagtcgcgcctccatgccacaa
caagcattgcgcttaggcaagggtgagaatttggtcggatgtgtcgccctcagtcagagt
gagaaactgttgctggtgactaaattgggatatgggaaacgcttgccagtggagttagtc
cgactcgccaaaccgggggatttgggtactcagtctatgacgtttaaaaataaaaccgat
gggttagtgggaatggtggcagcgcttcccgatgcggagttaaaattactcaccagtagc
gatcgcttcttgcggttgccggttaagtcagtgcgatccaaacgcaaagatgacgcaggc
gatcggttgctcaaacttgaacccaaagaaaccctcatttatctgagtgtttcctctccc
gaaccggaacaatatgtctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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