KEGG   Octadecabacter arcticus: OA238_c27410
Entry
OA238_c27410      CDS       T02539                                 
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
oar  Octadecabacter arcticus
Brite
KEGG Orthology (KO) [BR:oar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oar03009]
    OA238_c27410 (rluD)
Enzymes [BR:oar01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     OA238_c27410 (rluD)
Ribosome biogenesis [BR:oar03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    OA238_c27410 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Other DBs
NCBI-ProteinID: AGI72776
UniProt: M9RQP6
Position
complement(2922938..2923972)
AA seq 344 aa
MSATTVLFTLAENPPARMDKALALNVPLDASLSRSRLMRLLADGAVQVNGTVVTDPRARP
VEGDTVEISVEIADDYHVLPENIPLDVVFEDDDLIVINKPTGMVVHPAPGTPGGTLVNAL
LHHCGDALSGVGGEKRPGIVHRIDKETSGLLVVAKTDRAHHRLAAQFEAHTVERHYRAIC
YGVPDSNDPRVRGIKGASFEPGNILKLQTQLARHKHDRQKQAVIWHNGRHAVTRARVVQP
LGNPAVAAVMDCWLETGRTHQIRVHLTHAGHGLIGDPTYGGRRKLSEKAVGEGGRIAAYT
FPRQALHAATLGFQHPVSKEMLRFEAPMPADMVGLIAALGGTQG
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgtctgccaccacagttctgttcacccttgccgaaaacccgcccgcgcggatggacaag
gcgctggcgttgaatgtcccgcttgatgcgtcgctcagccggtcgcgcctgatgcgtttg
ctggcggatggggctgtgcaggtgaatggcacggtggtgacggacccgcgtgccagaccc
gttgaaggcgatacagttgagatatctgtggagattgcggacgactaccacgtcttgccc
gaaaacattccgctggatgtggtgtttgaagacgatgatctgatcgtcatcaacaaacca
actggcatggtcgtgcatcctgcccccggcacgccgggtggtacattggtgaatgcgctg
ctgcatcactgcggcgatgcgctgtctggtgttggcggcgaaaagcggcccggtatcgtg
catcgcatcgacaaggaaaccagtgggttgttggtcgtggccaaaacggaccgtgcgcat
cacaggctggccgcacagtttgaagcgcacacagtcgaacgccactaccgcgccatttgt
tacggtgtgccggattccaacgatccgcgcgtgcgaggcatcaagggcgcgagctttgag
cctgggaatattctgaaattgcaaactcaactggcgcgccacaaacatgaccgccagaaa
caggcggtcatctggcacaatggccgccacgctgtgacgcgcgcccgcgttgtgcagccg
ctgggcaatcctgcagtggccgcggtgatggattgttggctggaaaccggacgcacgcac
caaattcgtgtgcatctgacccatgcggggcacggtctgattggggatcccacctatgga
ggccggcgcaaattgtctgaaaaggcggtgggtgagggtggcagaatcgcggcctacacg
ttcccgcgccaagcactgcatgccgcgacattggggtttcagcaccccgtcagcaaagaa
atgctgcggttcgaggcgccaatgcctgccgatatggtcgggctgattgccgccttaggt
gggacgcaaggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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