KEGG   Ovis aries (sheep): 100144762
Entry
100144762         CDS       T03117                                 
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
oas  Ovis aries (sheep)
Pathway
oas03020  RNA polymerase
oas03420  Nucleotide excision repair
oas05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:oas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100144762 (POLR2A)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100144762 (POLR2A)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100144762 (POLR2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oas03021]
    100144762 (POLR2A)
   03400 DNA repair and recombination proteins [BR:oas03400]
    100144762 (POLR2A)
Enzymes [BR:oas01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     100144762 (POLR2A)
Transcription machinery [BR:oas03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     100144762 (POLR2A)
DNA repair and recombination proteins [BR:oas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100144762 (POLR2A)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_R RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 100144762
NCBI-ProteinID: XP_004013338
EnsemblRapid: ENSOARG00020013804
Position
11:27043345..27064082
AA seq 1970 aa
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDEN
NT seq 5913 nt   +upstreamnt  +downstreamnt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctcagtccggatgaactgaagcgaatgtctgtgacagagggcggc
atcaaatacccagagacgacggagggaggccgccccaagctcggtgggctgatggatccg
aggcagggggtgattgagagaacgggccgctgccaaacctgtgcaggaaacatgacagag
tgtcctggccactttggccacattgagctggccaagcctgtgttccacgttggcttcctg
gtcaagaccatgaaagttttgcgctgtgtctgcttcttctgctccaagttgcttgtggac
tctaacaacccgaagatcaaggacattttggctaagtccaaggggcagcccaagaagcgg
ctcacacacgtctatgacctctgcaagggcaaaaacatctgcgagggcggggaggagatg
gacaacaagtttggtgtggagcagcctgagggcgatgaagatttgaccaaagaaaagggc
cacggtggctgcggtcggtaccagccccggatccggcgctccggcctggagctatacgca
gaatggaagcatgtcaatgaggactctcaagagaagaagatcctgttgagccccgagcgg
gtgcatgagatcttcaagcgcatctccgacgaggagtgctttgtcctgggcatggagccg
cgctacgcccggcctgagtggatgatcgtcactgtgctgcccgtgcccccgctctccgtg
cggcccgctgtcgtgatgcagggctctgcccgcaaccaggacgacctgacccacaaactg
gccgacattgtcaagatcaacaatcagcttcggcgcaatgagcagaacggcgcagctgcc
catgtcatcgccgaggacgtgaagctcctccagttccacgtggccaccatggtggacaat
gagctgcctggcttgcctcgtgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcgattgaaggggaaggaaggccgtgtgcgtgggaacttgatgggcaagcgtgtggac
ttctcagcccgcactgtcattacccccgaccccaacctctccattgaccaggtcggcgtg
ccacgctccattgccgctaacatgacctttgcggagatcgtcacccccttcaacattgac
agacttcaggaactagtgcgcagggggaacagccagtacccgggagccaagtacatcatc
cgggacaacggtgatcgcattgacctgcgtttccaccccaagcccagtgaccttcacctg
cagactggctacaaggtggaacggcacatgtgtgatggggacattgttatcttcaaccgg
cagccaactttgcacaaaatgtccatgatgggtcatcgggttcgcatcctgccctggtcc
acttttcgcttgaatcttagcgtgacaactccatacaatgccgacttcgacggggatgag
atgaacttgcacctgccacagtccctggagacgcgggctgagatccaggagctggccatg
gtgccacgcatgattgtcaccccccagagcaatcgtccggtcatgggcattgtgcaggac
acattgactgctgtgcgcaaattcaccaagagggatgtcttcctggagcggggggaggtg
atgaaccttctgatgttcctgtccacgtgggatgggaaggtcccacagccagccatcctg
aagccccggcccctgtggacggggaagcagatcttctccctcatcatacccggccacatc
aactgtatccgcacccatagcacccaccccgacgatgaggacagtggcccttacaagcac
atctctcccggggacactaaggtggtggtggagaatggcgagctgatcatgggcatcctg
tgtaagaagtctttgggcacgtcggccggctccctggtccacatctcttaccttgagatg
ggtcacgacatcactcgcctcttctactccaacattcagactgtcatcaacaactggctc
ctcattgagggtcataccattggcattggggactccatcgctgattctaagacttaccaa
gacattcagaacacgattaagaaggccaagcaggatgtaatagaggtcattgagaaggca
cataacaatgagctggagcccacaccagggaacaccctgcggcagacatttgagaaccag
gtgaaccgcattctcaacgatgcccgagacaagaccggctcttctgcccagaaatcactg
tctgaatacaacaactttaagtctatggtcgtgtctggggccaaaggttccaagatcaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaagcggatcccattt
ggattcaagcaccggaccctgcctcacttcatcaaagatgactatgggcctgagagccga
ggctttgtggagaactcctacctggccggcctcacgcccactgagttcttcttccatgcc
atggggggccgtgaggggctgatcgacacagctgtcaagactgctgagactgggtacatc
cagcggcggctgataaagtccatggagtcggtgatggtgaagtacgacgccaccgtgcgc
aactccatcaatcaggtggtgcagctgcgctatggcgaggatggcctggcgggcgagagt
gtcgagttccagaatctggccaccctcaagccttccaacaaggcttttgagaagaagttc
cgctttgattacaccaatgagagggccctgcggcgcaccctgcaggaagacctagtgaag
gatgtgctgagcaacgcacacattcagaatgagctagaacgagaatttgagcggatgcga
gaggaccgggaggtgctcagagtcatcttcccaactggtgacagcaaggttgtcctcccc
tgcaaccttctgcgcatgatctggaacgctcagaagatcttccacatcaaccctcgcctt
ccctctgacctgcaccccatcaaggtggtagagggcgtcaaggagttgagcaagaagctg
gtgattgtgaatggggatgaccccctgagccggcaggcccaggagaacgccaccttgctc
tttaacatccacctgcggtccacactgtgttctcgccgcatggccgaggaattccggctc
agtggagaggctttcgactggctgcttggagagatcgagtccaagttcaaccaagccatt
gcccatccgggggaaatggtgggagctctggctgcacagtcccttggagaacctgccacc
cagatgaccttgaacaccttccactatgctggtgtgtccgccaagaacgtgactctgggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaagaccccctcacttacg
gtcttcctgctgggccagtctgctcgagatgcagagagagccaaggatattctgtgccgc
ttggaacacacaacattgaggaaggtgaccgccaacacggccatctactatgaccctaac
ccccagagcacagtggtggccgaggatcaggagtgggtgaatgtctactatgagatgcct
gactttgatgtggcccgaatctccccttggcttttgcgggtggagctggaccggaagcac
atgactgaccggaagctgaccatggagcagattgcggaaaagatcaatgctggcttcggt
gacgacttgaactgcatctttaacgatgataacgcagagaagctggtgctccggatccgc
atcatgaacagtgatgaaaacaagatgcaagaggaggaagaggtggtggacaagatggac
gacgacgtcttcctgcgctgcatcgagtccaacatgctgacggacatgaccctgcagggc
atagagcagatcagcaaggtgtacatgcacttgccgcagactgacaacaagaagaagatc
atcatcacagaggacggggagttcaaggccctgcaggagtggatcctggagacggacggt
gtgagcctgatgcgtgtgctgagtgagaaggatgtggaccctgtgcgcaccacatccaac
gacatcgtggagatcttcacggtgctgggcattgaggctgtacggaaggccctggagcgg
gagctgtaccacgtcatctccttcgacggctcctacgtcaattaccggcacttggctctc
ctgtgtgataccatgacctgtcgtggccacttgatggccatcactcgccatggagttaac
cgccaggacactggacctctcatgaagtgctcctttgaggaaacggtggacgtgctcatg
gaagcagctgcgcacggagagagtgaccccatgaagggggtgtccgagaacatcatgctg
ggccagctggctccagctggcaccggctgttttgacctcttgctcgatgcagagaagtgc
aagtacggcatggagatccccaccaatatcccaggcctgggggctgccggacccaccggc
atgttcttcggctcggcccccagtcccatgggaggaatttctccagccatgacaccctgg
aaccagggtgcaaccccagcctacggtgcctggtctcccagtgttgggagtgggatgacc
ccgggagcagcaggcttctctcccagtgctgcctcagacgccagcgggttcagccctggc
tattccccggcctggtctcccacaccaggctccccgggctccccaggcccctcaagcccg
tatatcccctcaccagggggtgccatgtctcccagctactccccgacatcacctgcctat
gagccccgctcccctggaggctacacaccccagagtccctcttactcccccacttcccct
tcctactcccctacttctccatcctactctccaaccagccccaactacagccccacgtca
cccagctactccccgacctctcccagctactcacccacttctcccagctattcacccacg
tctcccagctactcgcccacttccccaagctactctcccacatcacctagctactcaccc
acatcacccagctactcgcccacctctcccagctactcgcccacctcgcccagctactcg
cccacctcgcccagctactcgcccacctcgcccagctactcgcccacttcgcccagctac
tcaccgacatctccaagctattcaccaacatcgccaagctactctccaacttctccaagt
tactcacccaccagtcctaactattctccaaccagtcccaattataccccgacatcaccc
agctatagcccaacatcaccgagctactcacctaccagtcccaactacacaccaacaagc
cccaactacagcccaacctctccaagctactctccaacttcacccagctactccccaacc
tcgccaagctactctccttcaagcccacgatacacaccacagtctcccacctacaccccc
agctcgcccagctacagccccagctcgcccagctacagcccgacttcgccaaagtacacc
ccaaccagtccttcctatagccccagctcaccagagtacacccccacctcccccaagtac
tcacctaccagccccaaatattcacccacctcccccaagtactcacctaccagccctacc
tactcacccaccaccccaaaatactcacccacatcgcctacttactcaccaacctctcct
gtctacaccccaacctcccccaagtattcacccactagccccacctactctcccacctcc
cccaagtactcgcccaccagccccacctactcccccacctccccgaaaggctctacttac
tcgcccacctcccctggctactcgcccaccagccccacttacagcctcaccagtccagcc
atcagcccggatgacagtgatgacgagaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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