KEGG   Ovis aries (sheep): 101122526
Entry
101122526         CDS       T03117                                 
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:3.6.4.13]
Organism
oas  Ovis aries (sheep)
Brite
KEGG Orthology (KO) [BR:oas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oas03041]
    101122526 (YTHDC2)
Enzymes [BR:oas01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     101122526 (YTHDC2)
Spliceosome [BR:oas03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    101122526 (YTHDC2)
SSDB
Motif
Pfam: YTH HA2_C Helicase_C OB_NTP_bind R3H DEAD HA2_N Ank_2 AAA_19 nSTAND3 AAA_22 Ank ATPase PhoH AAA_7 AAA_16 UvrD-helicase Ank_4 AAA_29 T2SSE SRP54 AAA_23
Other DBs
NCBI-GeneID: 101122526
NCBI-ProteinID: XP_014952261
EnsemblRapid: ENSOARG00020016411
Position
7:2355801..2427790
AA seq 1429 aa
MSRPSSVSPRPPAPGGGGGGPAPCCPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQ
REMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTH
NTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKR
GESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPC
RIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLM
AGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFG
SCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENT
FKPESQRQRAIPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKD
VDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANIHSKASNGW
MALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDD
EKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFML
HSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVT
MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK
LLAPVNCAIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHL
GKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALL
RAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV
NTNSENWAVVKAALVAGMYPHLVHVDRENVVLAGPKEKKVRFHPTSVLSQPQYKKIPPAN
GQTAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFR
ADGIPNDSSDSEMEDRTTANLATLKLDEWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAP
SKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRKS
SADTEFSDESTTAERVLMKSPAPTLHQPQKYKDRGILHPKRSTEDRSDQSSVKSTDSSNY
PSPCASPSPPSSGKGSKSPSPKPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLN
RAFWESSVVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLPF
QFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKTATD
NT seq 4290 nt   +upstreamnt  +downstreamnt
atgtcgaggccgagcagcgtctccccgcggccgccggctcccggtgggggcgggggcggc
cccgcgccctgttgccctgggggcggcggccgggccaaggggctgaaggacattcgtata
gacgaggaggtgaagatcgcagtcaatatcgctctggagcgcttccgctatggggaccag
agagaaatggaatttccttcttctttgaccagtacagaaagagcctttattcatcggttg
agtcagtctcttggtttggtttctaaaagtaaaggaaagggagcaaatagatacctaact
gtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgactcat
aatacaaaacatgctgttaggagcctaattcagagatttcctgtcaccaataaagagcgt
actgaacttctgcctaaaacagaaagaggaaatgtgtttgctgttgaagctgaaaatcga
gaaatgagcaagacaagtgggcgactcaacaacggcatacctcagattccagtaaaaaga
ggagaatctgaatttgattctttcagacaatctctgccagtgtttgaaaaacaagaggaa
attgttaaaataattaaggaaaataaagtagttttgattgtaggagaaactggatctgga
aagactacacagattcctcagttccttttagatgattgctttaaaaatggtattccctgc
cgtatattttgtactcaaccaagacggttagcagctattgctgtggctgaaagagttgct
gcagagaggagagaaaggattggtcaaacaattggatatcagatccgtttagaaagcagg
gtttctccaaagacacttctgacattttgcacaaatggggtactgcttcgtacactgatg
gcaggagatagtacattgtcaactgtgacacatgttattgtggatgaagttcatgaaagg
gatcgatttagtgattttttacttacgaagttaagagatttactgcagaagcacccaact
ttgaaactaattctttctagtgctgccttagatgtaaatctttttataagatattttggg
agctgtccagtgatatatatacaaggaagaccatttgaagtaaaagaaatgtttttggaa
gacattttaagaactactggatatacaaacaaagaaatgttaaaatacaaaaaggaaaaa
caacgagaggaaaaacagcaaaccacacttacagaatggtactcagctcaagagaatact
ttcaagcctgaatctcagagacagagagctatcccaaatgtgactgaagagtatgattta
ttggatgatggtggtgatgctgtcttcagtcagctgacagaaaaagatgtgaattgcctt
gaaccatggttaataaaggaaatggatgcttgtctttctgacatatggctgcataaagat
gttgatgcctttgctcaggtctttcaccttattttaacggaaaatgttagtgttgattat
agacatagtgaaaccagtgcaacagctctgatggttgctgcaggacgaggtttctcaagt
caagtagaacagttgattagtatgggagccaatattcatagtaaagcatcgaatggctgg
atggctttagattgggctaaacactttggccagactgaaattgtggatcttctagaatct
tacagtgcttctttggaatttggaaatctggatgaaagctctttggttcaaacaaatggg
agtgacctcagtgcagaagacagagaacttctgaaagcttatcaccatagttttgatgat
gaaaaagtagacttggatttgattatgcatcttctatacaatatctgccatagttgtgaa
gctggtgcaatattgatttttctacctggatatgatgaaattgttggtctgagggatcgc
atcctgtttgatgacaagcggtttgctgataatgcacatagataccaagtctttatgctt
cattcaaatatgcaaacatctgatcaaaagaaggtattaaaaaacccacctgcaggtgtt
cggaaaataatcctttccaccaatattgctgaaaccagcatcacagtcaatgatgttgtc
ttcgttattgattctggtaaggtgaaagagaaatcctttgatgcactgaattttgttaca
atgttaaaaatggtatggatttccaaagctagcgccatacaacgaaaaggcagggcaggg
cgatgcagacctggaatttgtttccgactgttcagtagacttcgattccagaatatgttg
gaatttcagactccagaacttttgagaatgccattacaggaactgtgtttacataccaag
ctgttagccccagttaattgtgctattgctgatttccttatgaaagctcctgaacctcca
ccagctttaattgtaagaaatgctgtacaaatgcttaagacaatagatgcaatggatgca
tgggaagatctcactgaacttggatatcatttggctgacttgccagtagagccacatctt
ggtaaaatggtcctgtgtgctgttgttttgaagtgtctggatcccatccttacaattgcc
tgcacactagcttatcgagatcctttcgtcctgccaactcaggcctctcagaaacgtgca
gctatgctttgtaggaaacgtttcactgcaggaactttcagtgaccacatggcacttctc
agagcattccaggcatggcagaaagctcgaagtgatgggtgggagcgagctttttgtgaa
aagaattttctttcacaagctaccatggaaataatcataggcatgagaactcagttgctt
ggtcagcttagagcatcaggttttgtgagagcaagaggtggtggtgacattcgagatgtt
aacacaaattctgagaattgggctgttgttaaagctgcgttggttgcaggcatgtatcct
catttagttcatgtggacagagagaatgtagtattggcaggcccaaaggagaaaaaagta
cggtttcatcccacttcagttctcagtcagcctcaatataaaaagattcctccagcaaac
ggtcaaactgcagcaatccaggcactgcccacagattggcttatttatgatgaaatgact
agagctcataggatagctaatattagatgctgttcagcagtgacacctgtcactgtgttg
gtattttgtggaccagctaggttggcaagtaatgctcttcaggaaccttcatcttttcgt
gcggatggtattcctaatgacagtagtgatagtgaaatggaagacaggactactgctaat
ttggcaactttaaaacttgatgagtggcttagtttcaaactagagccagaggcagccagt
ttattgctgcaacttagacagaagtggcacagcttatttttacgtcgaatgagagctcca
tccaaaccttggtctcaagttgatgaagctactataagagcaattatagctgttttaagc
actgaagaacaatctgcaggtttacaacagccatctgggattggccaaaggccaagacct
atgtcttcagaagaacttcctttggcatcatcttggaggtcaaataatagtagaaaaagt
tcagcagatactgaattttctgatgagtctactactgcagaaagagtactgatgaaatct
ccagctccaacactacaccagcctcagaagtacaaagatagaggaattttgcatcctaaa
cgaagcactgaggaccggtcagatcaatcttctgtgaaatctacagacagcagtaattat
ccaagtccttgtgctagtccttctcctccatcctcaggaaagggctcaaaatctccttca
ccaaaaccaaacatgcctattcgatacttcataatgaagagtagcaatctgagaaacctt
gaaatttctcaacagaagggtatctggtctacaactcctagtaatgagcggaagctaaat
cgagccttttgggaaagcagcgtggtttacttggtattttctgttcaaggatccgggcat
ttccagggattttctagaatgtcttctgagataggaagagagaagagtcaggactggggc
tcagctggactaggaggagtgtttaaggtggagtggatacggaaagaaagtcttcccttt
cagtttgcacaccatttactcaatccttggaatgacaacaagaaagtccagataagcaga
gatgggcaggaactagaacctcaggttggtgaacagttgctccagttatgggaacgcctt
ccattgggagaaaaaaccgcaactgattaa

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