KEGG   Ovis aries (sheep): 101123531
Entry
101123531         CDS       T03117                                 
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
  KO
K04833  voltage-gated sodium channel type I alpha
Organism
oas  Ovis aries (sheep)
Pathway
oas04728  Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:oas00001]
 09150 Organismal Systems
  09156 Nervous system
   04728 Dopaminergic synapse
    101123531 (SCN1A)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:oas04040]
    101123531 (SCN1A)
Ion channels [BR:oas04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   101123531 (SCN1A)
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH ATP-synt_B Neur_chan_memb FUT8_N_cat IQ Pns11_12
Other DBs
NCBI-GeneID: 101123531
NCBI-ProteinID: XP_060267096
EnsemblRapid: ENSOARG00020010370
Position
2:143441362..143596860
AA seq 1938 aa
MVIKMCRMTRWSKQCLYHQDLTASTSSPENPLRLLKDALQKKRLRIPNQTRKMTMNMAQS
QIVTWKPERTFLLFMETSLQRWCQSHWRTWIPTISIRKYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHTVEKNITKSY
NGTLVNETQNEFDWKSYIQDSRYHYFLEGFSDALLCGNSSDAGQCPEGYMCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAVTASEHSREPSTGGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDDDEFQKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESR
QKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYP
MTDHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLAN
VEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQL
FGKSYKDCVCKINSECKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTV
FMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGIAYVKRKIY
EFIQQSFVRKQKILDEIKPLDDLNNRKDNCMSNHTTEIGKDLDYLKDVNGTTSGIGTGSS
VEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSS
SEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGRGKQWWNLRRTC
FRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKW
VAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFE
GMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGDMFDISEVN
NHSDCLILIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQP
KYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSDYVTS
ILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN
FAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSS
VKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEV
WEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAF
TKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLL
KRTVKQASFTYNKNKIKGGANLLVKEDMIIDRINENSITEKTDLTMSTAACPPSYDRVTK
PIVEKHEQEGKDEKAKGK
NT seq 5817 nt   +upstreamnt  +downstreamnt
atggtgattaaaatgtgcaggatgacaagatggagcaaacagtgcttgtaccaccaggac
ctgacagcttcaacttcttcaccagagaatcccttgcggctattgaaagacgcattgcag
aagaaaaggctaagaatcccaaaccagacaagaaagatgacgatgaacatggcccaaagc
caaatagtgacttggaagccggaaagaaccttccttttatttatggagacatccctccag
agatggtgtcagagccactggaggacctggatccctactatatcaataagaaagtacacc
ttcacaggaatatatacttttgaatcacttataaaaattattgcaaggggcttctgttta
gaagattttactttccttcgagacccatggaactggcttgacttcactgtcattacattt
gcatatgtgacagagtttgtggacctgggcaatgtctccgcattgagaacattcagagtt
ctccgagcactgaaaaccatttcagtcattccaggtctgaaaaccattgtgggggcactg
atccagtctgtgaaaaagctctcagatgtcatgatcctaactgtgttctgtctgagtgtg
tttgccctgattgggctgcagctctttatgggcaacctgcggaataaatgtgtacaatgg
cctcccaccaatgcttccctggaggaacacactgtagagaagaacataaccaagagttac
aatggcacacttgtaaacgaaactcaaaatgagtttgactggaagtcgtatattcaagat
tcaagatatcactattttctggaaggtttttcagatgcactattatgtggaaatagctca
gatgcaggccaatgtccagaaggatacatgtgtgtgaaagctggtagaaatcccaattat
ggctacacaagctttgatactttcagttgggcttttttgtcgctgtttcgactgatgact
caggacttctgggaaaatctttaccagctgacgctgcgtgctgctgggaaaacatacatg
atattttttgtgctggtcattttcttgggctccttctatctaataaatttgatcctggct
gtggtggccatggcctatgaggaacagaatcaggcaacgctggaagaggcggaacagaaa
gaggctgaatttcagcagatgctcgaacagcttaaaaagcaacaggaggcagctcagcag
gcagcagctgtaactgcctcggagcattccagagaacctagtacaggaggcaggctctca
gacagctcatctgaagcctccaagttgagttccaagagtgcaaaggaaagaagaaatcgg
agaaagaaaagaaaacagaaagagcaatctggtggagaagagaaagatgatgatgaattc
cagaaatctgaatctgaagacagcatcaggaggaaagggtttcgcttctccatagaaggg
aatcggttgacatacgaaaagaggtactcctccccacaccagtctttgttgagcatccgt
ggctccttattttctccaaggcgaaatagcagaacaagccttttcagcttcagagggcga
gcaaaggatgtgggatcagagaacgactttgctgatgatgagcacagcaccttcgaggat
aacgagagccgcagagactccttatttgtgccccgacggcacggagagcgacgcaacagt
aacttgagtcagaccagtaggtcgtcccgaatgctggccgtgtttccagccaatgggaag
atgcacagcactgtggattgcaatggtgtggtttccttggttggtggaccttcggttcct
acatcgcctgttggacagcttctgccagagggaacaaccactgaaactgaaatgagaaag
agaaggtcaagttcttttcatgtttccatggactttctagaagatccatctcagaggcaa
agagcaatgagcatagccagcattttaacaaatacagtagaagaacttgaagaatccagg
cagaaatgcccaccctgttggtataaattttccaacatattcttaatctgggactgttcg
ccatattggttaaaagtgaaacatattgtcaacctggttgtgatggacccttttgttgac
ctggccatcaccatctgcattgtcttaaataccctcttcatggccatggagcactatcct
atgacagaccatttcaataatgtgcttacagtaggaaacttggttttcactgggatcttt
acagcagaaatgtttctgaaaattattgccatggatccttactattatttccaagaaggc
tggaatatctttgatggttttattgtaacgcttagcctggtagaacttggcctggccaac
gtggaaggattatcagttctccgttcattccgtttgctccgagttttcaaattggcaaaa
tcttggccaacattaaatatgctaataaagatcatcggcaattcagtgggggctctggga
aatctgaccttggtgttggccatcatcgtcttcatttttgctgtggttggcatgcagctc
tttggtaaaagttacaaagattgtgtctgcaagatcaacagtgagtgtaagctccctcgc
tggcacatgaacgacttcttccactccttcctgattgtgttccgggtgctgtgtggagag
tggatagagaccatgtgggactgcatggaggtcgccgggcaagccatgtgcctgactgtc
ttcatgatggtcatggtcattggaaacctggtggtcctgaacctctttttggccttgctt
ctgagctcatttagtgcagacaaccttgcggccactgatgatgataatgaaatgaacaat
ctccagattgctgtggataggatgcacaagggaatagcttatgtgaagagaaaaatatat
gaatttattcaacagtcctttgttagaaaacaaaagattttagatgaaattaaaccactt
gatgatctgaacaacaggaaagacaattgtatgtccaatcatacaacagagattgggaaa
gatcttgactatcttaaagacgtaaatggaaccacaagtggaataggaaccggcagcagt
gttgaaaagtacattattgatgaaagtgattacatgtccttcataaacaatcccagtctt
actgtgactgtaccaattgctgtaggagaatctgactttgaaaatttaaacacagaggac
ttcagtagtgaatcagatctggaagaaagcaaagagaagcttaatgaaagcagtagttca
tctgaaggtagcactgtggacattggagcacctgccgaggaacagcctgtagtggaaccc
gaggaaacccttgaacctgaagcctgttttactgaaggctgtgtgcaaagattcaaatgt
tgtcaaattagtgtggaagaagggagaggaaaacaatggtggaatctgagaagaacgtgt
ttccgaatagttgaacataactggtttgagaccttcattgttttcatgattctccttagc
agtggtgcactggcatttgaggatatatatattgaccagcgaaagacgatcaaaacaatg
ttggagtatgctgacaaggttttcacttacattttcattctggaaatgctcctaaaatgg
gtggcatatggctatcaaacatatttcaccaatgcctggtgttggctagacttcttaatt
gttgatgtttcattggtcagtttaacagcaaatgccttgggttactcagaacttggtgcc
atcaaatctctcaggacactaagagctctgagacctctaagagccttatcacgatttgaa
gggatgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaatgtactt
ctggtttgtcttatattctggctaattttcagcatcatgggcgtaaatttgtttgctggc
aaattctaccactgtgttaacaccacaactggtgacatgtttgacatcagcgaagtgaat
aatcattctgattgcctaatactaatagaaagaaatgagactgctcgctggaaaaatgtg
aaagtaaactttgataatgtaggatttgggtatctctctttgcttcaagttgccacattt
aagggatggatggatataatgtatgcagcagttgattccagaaatgtggaactccagcct
aagtatgaggaaagtctatacatgtatctttactttgttattttcatcatctttgggtcc
ttcttcaccttgaacctgtttattggtgtcatcatagataatttcaaccagcagaaaaag
aagtttggaggtcaagacatctttatgacagaagaacagaagaaatactataatgcaatg
aaaaaattaggatcaaaaaagccacagaagcctatacctcgaccaggaaacaaattccaa
ggaatggtctttgattttgtcaccaggcaagtttttgacatcagcatcatgattcttatc
tgtctcaacatggtcaccatgatggtggagaccgacgaccagagtgactatgtgactagc
attttgtcacgcatcaacttggtgttcattgtgctgttcactggagagtgtgtgctgaag
ctcatctccctccgccattactattttaccataggctggaatatctttgattttgtggtg
gtcattctctccatagtaggtatgtttctggctgagctgatagagaaatattttgtgtcc
cctaccttgttccgagtgatccgtcttgccaggattggccgaatcctgcgtctgatcaaa
ggggccaaggggatccgcacactgctctttgctttgatgatgtcccttcctgcgctgttt
aacatcggcctcctgctcttcctggtcatgttcatctatgccatctttggaatgtccaac
tttgcctatgttaagagggaggttggaattgatgacatgttcaactttgagaccttcggc
aacagcatgatctgcctgttccagattaccacctctgctggctgggatggattgctagca
cctatcctcaacagtaaaccacccgattgtgaccctaataaagttaaccctggcagctca
gttaaaggagactgtgggaacccgtctgttgggattttcttctttgtcagttacatcatc
atatcatttctggtcgtggtgaacatgtacattgctgtcatcctggagaacttcagtgtt
gctactgaagaaagtgcagagcccctgagtgaggatgactttgagatgttctacgaggtt
tgggagaagtttgatcctgatgccacccagttcatggaatttgaaaagctatctcagttt
gcagctgctcttgaaccaccactcaatttaccacaaccgaacaaactccagctcattgcc
atggatttgcccatggtaagtggtgatcgaatccactgtcttgacatcttatttgctttt
actaagcgggttcttggggagagtggagagatggatgcccttcgaatacagatggaagag
agattcatggcctccaacccatcgaaggtctcctatcagccaataacgacaactttaaag
cgaaaacaggaggaagtgtctgctgttattattcagcgtgcctacaggcgccacctttta
aagcgaactgtaaaacaggcatcatttacgtacaacaaaaataaaatcaaaggtggggct
aatcttcttgtaaaagaagacatgataattgacagaataaatgaaaactcaattacagaa
aaaactgatctgaccatgtccacagcagcttgtccaccctcctatgatcgggtaacaaaa
ccaattgtggaaaagcatgagcaagaaggcaaagatgaaaaagccaaagggaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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