KEGG   Lacunisphaera limnophila: Verru16b_01391
Entry
Verru16b_01391    CDS       T04567                                 
Name
(GenBank) Putative multidrug export ATP-binding/permease protein
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
obg  Lacunisphaera limnophila
Pathway
obg02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:obg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Verru16b_01391
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:obg02000]
    Verru16b_01391
Enzymes [BR:obg01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     Verru16b_01391
Transporters [BR:obg02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    Verru16b_01391
SSDB
Motif
Pfam: ABC_membrane ABC_tran AAA_16 SMC_N AAA_29 AAA_22 nSTAND1 AAA_28 DUF87 AAA_21 AAA_30 Cytidylate_kin AAA_5 RsgA_GTPase SRP54 AAA DEAD AAA_18 AAA_25 Zeta_toxin
Other DBs
NCBI-ProteinID: AOS44330
UniProt: A0A1D8ATY0
Position
complement(1656491..1658251)
AA seq 586 aa
MNSSDRRGTIVRTLALCRPFAGRLGLGAALMVLATALALPTPWLFKLLLDEALPHQDVKL
LLVLVGVSLLLLTTRGLLTLFRNRLLQKVTMRLVCDLRIRLFAHLQTVSLRYYDSAQTGE
TVSRICQDTGELYNLTNGILINLIADTVMVVAVLGFLFLIEWQLALAACLVLPLFLFNYL
HHRQKMQGESRTHRQHWDIVVGFLHEKVANPRVIKAFGREADEVSAFASGINEDYFNYSR
VVMRNTLLSVVAETLAAVGGAIVLGYGGWLVLQERMAVGTLVAFNAYLALVFPPIVRFVD
MAGIFHRAFTGMENVFKLLDLTPDVMDAPGAQSLDQIKGEVRFEGVDFNYDPRSRNGRPA
TLSEVTFTVPPGQAVAIVGPSGSGKSTLVGLLARFYEPTAGRVLLDGHDLRDVSLASLRR
HIALVPQESILFSGTIEDNLRYGRPAATREEIVAAAKIANAHDFILQLGDGYSTVVGERG
AQLSGGQRQRIAIARALLTNPRILIFDEATSALDAASEQLIQASMREIARGRTVFSIAHR
LATVRHADQILVLDAGRLVEQGSHEELQQRGGLYAHLHALQFRDHA
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgaattcttccgaccgtcgcggcacgatcgtccgcaccctggccctctgtcgacctttt
gccggccggctgggtctcggggccgcgttgatggtgctggcgactgccttggcactgccg
acgccctggttgttcaagctgctgctcgatgaagccctgccccaccaagacgttaagttg
ctgctagtgctggtgggcgtatcgctgctcctgctcaccacacgtgggctgctcaccctg
ttccggaaccgcctgctgcaaaaagtcacgatgcggctcgtgtgcgatttgcgtatccgg
ctcttcgcccacctgcaaaccgtctcgctgcgctattacgattccgcccagaccggcgag
accgtctcacgtatctgccaggacacgggcgaactctacaacctgaccaatggcattctg
atcaacctgatcgcggacacggtgatggtggtggcagtgctgggttttctgtttttgatc
gagtggcagctggcgctcgcggcctgtctggtgctgcccttgtttttgttcaactacctg
caccaccggcagaagatgcaaggggagagtcggactcaccgccagcattgggacatcgtc
gtgggcttccttcatgagaaggtggcgaatccgcgcgtgatcaaggcgtttggccgcgag
gccgacgaagtatcggccttcgcgagcggcattaatgaggactacttcaactattcccgc
gtggtcatgcgcaacaccctgctctccgtcgtcgccgaaaccctggccgccgtgggcgga
gccatcgtgcttggttacggcggctggctggttttgcaggagcgaatggcggtggggacg
ctggtcgccttcaacgcttacctggcgctcgtgtttcctcccatcgtccgctttgtggac
atggccgggatttttcatcgcgccttcacgggcatggaaaatgtattcaaactgctggac
ctgaccccggatgtcatggatgcacccggggcgcagtcgctggaccagatcaagggcgag
gtccggttcgagggggttgactttaactacgatccccgttcgcgcaatggccggcccgcg
acgctcagcgaggtgacattcaccgtcccgcccggccaagcggtagccatcgtgggcccc
agtggatcgggtaaatccacgctggtgggactcctcgcccggttttatgagcccaccgcc
ggccgcgtgctgcttgatggccacgatctccgggacgtttctctggcctcgctgcgccgg
cacatcgccctcgtcccgcaggagagcattctgttttccggcaccatcgaggacaacctg
cgctatggccgccccgccgcgacgcgcgaggagatcgtggcggcggccaagatcgcgaac
gcgcatgacttcattttgcaactgggcgacggctatagcaccgtcgtgggcgaacgcggt
gcgcagctctcgggcggtcagcgccagcgcatcgcgattgcccgcgcgctgctgaccaat
ccgcgtattttgatcttcgacgaggccaccagtgccctcgatgcggcatccgaacagctc
attcaggcgtccatgcgggagatcgcccgggggcgcaccgttttcagcatcgcccaccgc
ctggccacggtgcggcatgcggatcagattctcgtgctcgacgctggccggctggtcgag
caggggagccatgaggagttgcagcaacgcggcggcctatatgcccatcttcacgccctc
cagttccgggatcacgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (43)   

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