KEGG   Lacunisphaera limnophila: Verru16b_02534
Entry
Verru16b_02534    CDS       T04567                                 
Symbol
hsdR
Name
(GenBank) Type-1 restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
obg  Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:obg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:obg02048]
    Verru16b_02534 (hsdR)
Enzymes [BR:obg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Verru16b_02534 (hsdR)
Prokaryotic defense system [BR:obg02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Verru16b_02534 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N_2 AAA_34 Helicase_C_2 SNF2-rel_dom AAA_19
Other DBs
NCBI-ProteinID: AOS45453
UniProt: A0A1D8AX43
Position
3002914..3005289
AA seq 791 aa
MPDLDKKSLTEADIRSKFITPALVGLNGEKWNLMTQIREEAFFTKGRVIVRGKTVKRGEA
KKADYILSYKPNLPLAVVEAKDNNHSVGAGMQQALEYAEILDVPFAYSSNGDAFLEHDRT
VTSGRVTREIPLDQFPTAEELWARYRQAKGFSAKQEAVATQDYYDDGSRKIPRYYQHIAI
NRTVDAIARGENRILLVMATGTGKTYTAFQIIWRLWKSGAKKRILFLVDRNILADQTKTN
DFKPFGQAMTKITNRTVDKAFEIYLCLYQAVTGTEEERNIYKQFSPDFFDLIVVDECHRG
SADNDAAWRQVLEYFSSATQIGLTATPKETKTVSNIEYFGEPIYTYSLRQGISDGFLAPY
KVVRLGLDKDLDGWRPEAGQTDKYGQIIEDREYNSKDYDRNLVLEKRTTLVAAKVTEFLK
ATNRFAKTIIFCENIDHAERMRQAMVNANPDLAAANAKYVMRITGDNDEGKAQLDNFIDP
ESTYPVIACTSRLMSTGVDAQTCHLIVLDRSIASMTEFKQIIGRGTRINEDYGKLYFTIM
DFRQVTALFADPDFDGEPMQIYSPGPGETPVPPDEDPEDGLEEPPGGVVKEPPGGFGDPE
PGPVRTKYYVNNVEVRVATERVQYLDANGKLITESLKDYSRKTVRSAYASLEDFLTVWRD
AERKQAILEELAAKGVFLDELAEQVGRDYDAFDLVCHVAFEAPPLTRKERAEKVKKRNVF
GKYGGQARAVLDALLQKYADSGLKSVESLEILKVDPLTAYGTPMEIVALFGGKPSYVAAV
RELETALYQVA
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgcccgacttggataagaaatctctcaccgaggcggacatccgttccaaattcataaca
cccgcactcgtcgggctgaatggtgagaagtggaatctgatgacccagattcgagaggaa
gcatttttcactaaagggcgggtcatcgttcgaggcaaaacggtcaaacggggcgaggcc
aagaaggccgactacatcctgtcctataaaccgaacctgcccctcgcggttgtcgaggcc
aaggacaacaaccactcggtcggcgcaggcatgcaacaggcgctggagtatgctgagatt
ctcgacgtgccctttgcctatagttccaacggtgacgcattccttgaacacgaccgcacg
gtcacgagcggtcgggtcacgcgcgagatcccgctcgatcagttccccacggcggaggaa
ctgtgggcccgctaccgccaggccaagggcttctccgccaagcaggaagccgtcgccacc
caagactactacgacgacggctcgcgcaagatcccccggtactatcagcacatcgcgatc
aaccgcacggttgacgccatcgcccggggcgaaaaccgcatcctgctcgtcatggcgacc
ggcacgggcaagacctacaccgctttccagatcatctggcggctgtggaagtccggcgcc
aagaaacgcatcctcttcctcgtcgatagaaacatcctcgccgaccagacgaagaccaac
gacttcaagccattcggccaggcgatgaccaagattaccaatcgcaccgtcgacaaggca
ttcgagatctacctctgcctctaccaggccgtcaccggcaccgaggaagaacgcaacatc
tacaagcagttctcccccgacttcttcgacctgatcgtcgtggacgagtgtcaccgcggc
agcgccgataatgacgccgcctggcggcaggtgctcgaatacttcagctctgcgacccag
atcgggctcactgccacgccgaaggagaccaagaccgtctccaacatcgaatacttcggc
gaacccatctacacctactcccttcgccaaggcatctccgacggcttcctcgcgccctac
aaggttgttcgcctcggcctcgacaaggatctcgacggctggcggccggaagccgggcag
accgacaaatacgggcagatcatcgaggaccgcgaatacaactccaaggactacgaccgc
aacctcgtcctcgaaaagcgcacgaccctcgtcgccgccaaggtcaccgagttcctgaag
gccaccaaccgcttcgccaagaccatcatcttctgcgaaaacatcgaccatgctgagcgc
atgcgacaggccatggtcaacgccaaccccgacctcgccgccgccaacgccaaatacgtg
atgcgcatcaccggcgacaacgacgagggcaaggcccagctcgacaacttcatcgatccc
gagtccacgtatccggtcatcgcctgcacgtcgcgcctcatgagcaccggcgtcgatgcc
cagacctgccacctcattgtcctggatcgcagcatcgcctccatgaccgagttcaagcag
atcatcggccgcggcacccggatcaacgaggactacggcaaactctacttcacaatcatg
gatttccggcaggtgacggccctcttcgccgacccggatttcgacggcgagccgatgcag
atctactcgcctggtcccggtgaaactccggtcccaccggacgaagatcccgaggatggt
cttgaggagccgccgggtggggtggtgaaggaaccgccaggtggatttggtgatccagag
ccaggcccagtccggacgaaatattacgtcaacaacgtcgaggtccgtgtcgccaccgag
cgggtccagtatctcgatgccaacggcaagctcatcaccgagtcgctcaaggactactcc
cgcaagaccgtccgctcggcctacgcctcgctcgaggatttcctcaccgtctggcgtgac
gccgagcggaagcaggcgatcctcgaagaacttgcggccaagggtgtcttcctcgacgag
ctcgccgagcaggtcggccgtgattacgacgccttcgacctcgtctgccacgtcgccttc
gaagctccgccgctaacccggaaggaacgcgccgagaaggtgaaaaagcgcaacgtcttc
ggcaagtatggcggccaggcccgcgccgtgctcgatgccctgctccagaaatatgccgac
agcggcctcaagagcgtcgagtcgctggagatcctcaaggtcgacccgctcaccgcctat
ggaaccccgatggagatcgttgccctcttcggtggcaaaccctcctacgttgctgccgtc
cgcgagctcgaaacggcgctctatcaagtggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (53)   

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