KEGG   Octopus bimaculoides (California two-spot octopus): 106868227
Entry
106868227         CDS       T04127                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106868227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obi03019]
    106868227
   03016 Transfer RNA biogenesis [BR:obi03016]
    106868227
Enzymes [BR:obi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     106868227
Messenger RNA biogenesis [BR:obi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     106868227
Transfer RNA biogenesis [BR:obi03016]
 Prokaryotic type
  tRNA degradation factors
   106868227
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase
Other DBs
NCBI-GeneID: 106868227
NCBI-ProteinID: XP_014768879
EnsemblRapid: LOC106868227
Position
4:complement(136947652..137156188)
AA seq 605 aa
MAVSAGQARVAFIRFYKHTHYVVSGGFLIKSFTNQCRWSSNSSTTAWQKRSKHGEIDVDI
GMRKLKITTGKFARFADGAAMVELGGTAVLVTAVCSEKVSSSGFMPLTVDFRQKAAAAGR
IPTNYLRREIGSTQHEILTSRMIDRSLRPLFPQGFCNETQLMCNLLSVDGDNNPDVLSIN
AASAALSLSSIPWNGPVGAVRVGLVNDEVTINPTRRQVSESTLNLIVACIDQYKVVMLES
SSDNILQQDFMRAIKQGVKETQLIIQAIKDLQKHHGCEKRQFTPPSALEEDILEAIKSMS
NLRIKEVFQDPRHDKISRDEAISVIRSDVLEKVKETYPDTEQGALVQSFGAICKEIFRNQ
ILDTNTRCDGRGLTDVRDIHCQVNLFQPLHGSALFQRGQTQVFCTVAFDSLESAMKLDPA
SDIKDKNFMLHYEFPPYATNETGRLSSIGRREIGHGYLAEKGLQAIIPEEYPFTIRLTSE
VLESNGSSSMASVCGGSLALMDAGVPIKEPVAGVAMGLVARINEAKSNVIEDYRIMTDIL
GIEDYMGDMDFKLAGTRKGITALQVIFRFCAQHDFSQLYLLVVSSVMTKLFFTYKHIANA
MLSPK
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggccgtctccgcggggcaagcacgtgttgccttcattcgtttctataaacacacacat
tacgtggtcagcggtggcttcttaatcaaatcatttacaaaccagtgtcgatggtcttcg
aatagttcgacgactgcttggcaaaaacgtagtaaacatggagaaatagatgtggacatc
gggatgaggaaattaaaaataactacgggtaaatttgccagatttgcagatggcgctgca
atggttgagcttggtggcacagcggtactagtaacagcagtgtgttcagaaaaggtctca
tcttctggatttatgccactaacagtggatttccgacagaaagctgcagcagctggtcgt
atacctaccaattatttacgaagggaaattggtagcacgcaacacgagattttaacaagt
agaatgatagatcgttccctccgaccattatttcctcaaggattttgcaatgaaactcag
ctgatgtgtaatttactgtcagttgatggggataacaatcccgatgtccttagcattaat
gcagcttctgcagctttgagtctttcaagtattccatggaatggaccagttggtgctgtt
cgtgtcgggttagtaaatgatgaagttactatcaaccccaccagacgacaagtttctgaa
agtactcttaatctgatagtagcctgtatagatcaatacaaagttgtgatgctggaatca
agttctgacaatattctgcaacaggattttatgcgtgccataaaacagggtgtgaaagaa
acccagcttattatccaagctattaaagatttacagaagcaccatgggtgtgagaagagg
caatttactccaccatcagcattagaagaggatattttagaggccatcaaaagtatgtct
aacctacggattaaagaagtttttcaagatcccaggcatgacaaaatatcacgagatgaa
gctatcagtgtaattagaagtgatgttctggagaaagtgaaagaaacataccctgatact
gaacagggtgctctggtgcagtcttttggtgctatatgcaaggagatctttagaaatcaa
attcttgacacaaatacaaggtgtgatggccgaggtttgactgacgtcagagatatccat
tgtcaagttaatttgtttcaaccattgcatggatcagctttatttcaacgaggtcaaaca
caggtgttctgtacagtagcttttgactcattggaatcagccatgaaattggatccagct
tccgatattaaagataagaacttcatgttgcattatgagtttccaccatatgccacgaat
gaaactggtcggctatctagcattggaagacgagaaatcggacatggttacttggctgaa
aaagggttacaggctatcataccggaagaatacccctttaccatacgtcttacctcagaa
gtcttggagtcaaatggttcctcttctatggcttctgtatgtggtggcagccttgcacta
atggatgccggtgtaccaattaaggaacccgtggctggagtcgcaatgggtcttgtcgca
aggataaatgaagcaaaatccaatgtaattgaagattataggatcatgacagatattttg
ggtattgaagactacatgggtgacatggacttcaagttagctggtacaaggaaaggaatt
actgctctacaggtaatattccgtttctgcgctcagcatgacttttctcagttgtatctt
ctcgttgtttcttctgtcatgacaaaactattctttacttataaacacattgctaatgcc
atgttgtctcctaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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