KEGG   Octopus bimaculoides (California two-spot octopus): 106871620
Entry
106871620         CDS       T04127                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03020  RNA polymerase
obi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106871620
  09124 Replication and repair
   03420 Nucleotide excision repair
    106871620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obi03021]
    106871620
   03019 Messenger RNA biogenesis [BR:obi03019]
    106871620
   03400 DNA repair and recombination proteins [BR:obi03400]
    106871620
Transcription machinery [BR:obi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106871620
Messenger RNA biogenesis [BR:obi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106871620
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106871620
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 106871620
NCBI-ProteinID: XP_014773674
EnsemblRapid: LOC106871620
UniProt: A0A0L8HC86
Position
1:complement(192389188..192391734)
AA seq 172 aa
MFYHVSLEHEILLHPRYFGPNLLNIVRKKLFTEVEGTCTGKYGFVIAVTSIDNIGAGLIQ
PSRGFVVYPVKYKAIVFRPFKGEVFDAVVTQVNKVGLFTDIGPLSCFISRHSIPADMEFD
PNSNPHCYKTKDEDVVIQQEDEIRIKIVGTRVDAKDIFAIGTLMDDFLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccatgtgtcattagaacacgaaattctacttcatcctcgatactttggcccc
aatctactaaacattgtacgaaagaaattatttacagaagtggaaggaacctgtacaggg
aaatatggatttgttattgctgtcacatcgatcgataacattggtgcaggactgattcaa
cccagtagaggttttgttgtttatcctgttaaatacaaagcgatcgtcttcagaccattt
aaaggagaggtgtttgatgcagttgtaacccaagtgaacaaagttggcttatttactgat
attggacctttgtcatgttttatctcccgacattctattcctgctgatatggaatttgat
cctaattcaaatccgcactgttataaaaccaaagatgaagatgttgttatccaacaggaa
gatgaaatacgtatcaaaattgttggtaccagagtagatgcaaaagatatttttgctatt
ggaacacttatggacgatttccttggtttagttagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system