KEGG   Octopus bimaculoides (California two-spot octopus): 106871905
Entry
106871905         CDS       T04127                                 
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03440  Homologous recombination
obi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    106871905
   03460 Fanconi anemia pathway
    106871905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obi03032]
    106871905
   03400 DNA repair and recombination proteins [BR:obi03400]
    106871905
Enzymes [BR:obi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     106871905
DNA replication proteins [BR:obi03032]
 Eukaryotic type
  DNA Topoisomerases
   106871905
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     106871905
   FA (Fanconi anemia) pathway
     106871905
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-GeneID: 106871905
NCBI-ProteinID: XP_014774146
EnsemblRapid: LOC106871905
UniProt: A0A0L8HA35
Position
2:121998046..122035609
AA seq 857 aa
MKTVFMVAEKPSLAASLAKILSNNSMTSRKGYNGACSVHEYRGKFQGEPAYFKFTSVCGH
VMTLDFTGKYNNWDKVDPVELFIAPTVKKEASPNLHMPDFLKKEGKGSDYLVLWLDCDKE
GENICFEVIDAVLPVMKRNSDKNIYRAHFSAITESDVKRAMNNLGTPNENEAMSVDARQE
LDLRVGCAFTRFQTKFFQGKYGNLDSTLVSYGPCQSPTLGFCVERHDKIQSFKPETYWII
NVQVAHPDGKNVHVDWERYRVFDKEVVQMFLSMIKSADSARVYDVIKKEKTKSHPQALNT
VEMLRIASSALGMSPHHTMQIAERLYTQGYISYPRTETTHYPANFDLVGTLRQQTNSSQW
GSYVKDLLKQGIQKPRKGHDAGDHPPITPMKGASESELGHDAWKLYEYIAQHFIATVSPD
CRYMQTTIYFEIGQEKFTCTGNILSDPGYTAIMTWQAITDDEELPPFVKGENYNVSEVRL
AERQTGPPDYLTESELITLMEKHGIGTDASIPVHINNICERNYVQIISGRKLKPTTLGIV
LVHGYQKIDADLVLPTMRSAVEQQLNLIALGKACFNVVLEHALEIFRLKFKYFVNNISGM
DELFEVSFSPLASSGKPMSRCGKCRRYMKLIQAKPSRLHCSNCDDTYSLPQNGGIKLYQE
LKCPLDDYELVLWTTGTKGKSYPLCPYCYNNPPFKDMRKGSGCNECTHPTCQHAFSQNGV
SECLECSQGILVLDQSSAPKWRMACNKCSLVINLLEGAHKVTLKDDDCEECGASIINVDY
GKNKSPLPDNATDYTGCVFCDSTFKPLVEMHHAMAPRVRRTATRGGGAGRGKGRGRGRGK
GKHKPKDKMAQLAAYFV
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgaagactgtatttatggtggctgaaaagccatctttggctgcttcgttagccaaaatc
ttatccaacaacagcatgacatctcgaaaaggttataatggagcctgttcagtgcatgaa
tatcgaggtaaatttcaaggcgaaccggcttacttcaaatttacatcagtgtgtggtcat
gtcatgaccctggattttactggcaagtacaacaattgggataaagtcgatccggtggaa
ttatttattgcccctactgtgaaaaaagaagcttcaccaaatcttcatatgccagacttt
ttaaagaaagagggcaaaggttctgattacttagtattatggctagattgtgataaagaa
ggtgagaatatctgctttgaagtcattgatgctgttcttcctgttatgaagaggaattct
gacaagaacatataccgtgctcactttagtgctatcacagaatcagatgtgaagcgagct
atgaataacttgggcacacctaatgagaatgaagcaatgtcagttgatgccagacaagag
ttagatctgcgagttggttgtgccttcactcgattccaaaccaaattctttcagggcaag
tatggcaatttggatagcactttagtgtcatatggtccttgtcaatcacctacattgggc
ttctgtgtggagcggcatgataaaatccaatcatttaaacctgaaacctattggatcatt
aatgtacaggtggctcatcctgatggcaaaaatgtccatgttgactgggaacgatatcgt
gtgtttgataaagaagttgtacagatgttcctttccatgatcaaatctgctgattcagcc
agagtgtatgatgtgattaagaaagagaagaccaaatctcatccccaggctttaaacaca
gttgaaatgcttcggattgcaagttctgcgttgggtatgagtccccaccataccatgcaa
attgctgaacgattgtatacccaaggctatatcagttacccaagaacagaaacgacacac
tatcccgcaaactttgacctcgttggtaccttacggcagcaaaccaacagctcccagtgg
ggttcttatgttaaagaccttttaaagcaaggaattcagaaaccaaggaaaggtcatgat
gctggtgatcatccccctattactccaatgaaaggggccagtgagagtgaacttggtcat
gatgcctggaaactgtatgaatatattgcacaacattttattgctactgtctctcctgat
tgtcgttacatgcaaacaaccatttattttgagattggccaagagaagtttacctgtaca
ggtaatatactcagtgatcctggctacactgcaattatgacatggcaagctattacagat
gacgaggaactgccaccttttgtcaaaggagaaaattacaatgtttcagaagtccgactt
gctgaacgtcagactgggcctcctgattatctgacagaaagcgagttgattacattgatg
gagaaacatggtattggtactgatgcaagtattcctgttcacatcaataacatatgtgag
cggaattacgttcaaattatatcgggtcgtaaactaaaaccaactacattgggtatcgtt
ttggtgcatggctatcaaaagattgatgctgatttggttttaccaactatgagatctgct
gtagaacaacagctcaacttgatagcgcttggcaaggcatgttttaatgttgtgctggaa
cacgctttggaaatctttcgcctgaagttcaagtactttgtcaacaatatctctggcatg
gatgaattatttgaagtctctttttctcctttggcctcatcagggaaaccaatgtctagg
tgtggcaaatgtcgtcggtacatgaaactgattcaggcaaaaccaagcaggttacattgt
tcaaattgtgatgatacatactctttgccgcaaaatggtggaattaaactctatcaggag
ttaaaatgtcctctagatgactacgaacttgtactttggacaactggtacaaagggaaag
agttatcccttatgtccatattgctataacaatccacctttcaaagatatgcgcaaaggc
agtggctgtaatgaatgcacacatcctacatgtcaacatgcattttctcaaaatggcgta
tctgaatgtcttgaatgcagtcaaggtatcttggtattggaccaatcttcggcaccaaaa
tggcgtatggcatgtaacaagtgttcccttgtcatcaacctgttagaaggagcacataaa
gtcactttaaaggatgatgattgtgaagagtgtggtgcctctattataaatgttgactat
ggcaagaacaaatctccactaccagacaatgctactgattacacaggttgtgtattttgt
gacagcactttcaagcccctggttgaaatgcaccatgctatggcacccagagtgcgacgt
acagcaacacgtggcggaggagctggccgtggaaaagggcgtggccgagggcgtggtaaa
ggcaaacataaacccaaagacaaaatggcacagttagctgcatattttgtatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (71)   

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