KEGG   Octopus bimaculoides (California two-spot octopus): 106872890
Entry
106872890         CDS       T04127                                 
Name
(RefSeq) exosome complex component RRP45-like
  KO
K03678  exosome complex component RRP45
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106872890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obi03019]
    106872890
Messenger RNA biogenesis [BR:obi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     106872890
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 106872890
NCBI-ProteinID: XP_014775532
EnsemblRapid: LOC106872890
Position
7:19950563..19992168
AA seq 317 aa
MRESHFSTCERNFILQSISKKLRIDGRQPYDYRRLKITFGVERGCCQVELGKTRVLAQVT
AAVGQPKPNRPTDGILFVNVELSPMASPAFEPGRLSEFGVYVNRLMERCLKESRCLDTES
LCIVAGEKVWIIRIDLHVLNHDGNLIDSASIAAITSLAHFRRPDVEVSGEEVTVFPVEER
EPIALSLHHMPICVSFAFFQEGKYVLVDPTEKEEKVMDGKMVIGMNKYREICTLQMAGDM
LLMHEQILRCSNIAVVKVTEITELIQKALENDKQARATGAKFGFAESMEPQIISSDSSES
IKLWVSHITKLRILWKE
NT seq 954 nt   +upstreamnt  +downstreamnt
atgagggaatctcacttctccacttgtgaacgaaactttattcttcaatccatttcgaag
aaattaagaatcgatggacgccagccttatgattatcggcgactaaagattacatttggt
gtggaaagaggctgctgccaggtagaacttggtaaaaccagggttttggcacaagtaaca
gcagctgtaggacaaccgaaacctaaccgtcccacagatggcatcctgtttgttaatgtg
gaactctctcctatggcatcaccggcgtttgaacctggaaggctttccgaatttggagtt
tatgtgaatcgtctgatggagcgctgcctgaaggagtcccgttgtttagacactgagtca
ctttgcatcgttgccggggagaaggtgtggataattcgaattgatctccatgttttgaat
cacgatggcaatttgattgattctgcgagtattgcagccataacgtctcttgcacacttc
agacgtccagatgttgaagtgagtggggaagaagtcactgtgtttccagttgaagagagg
gaaccaattgccctcagcctccatcatatgcccatctgtgtctcgtttgctttctttcaa
gaaggcaaatacgtactggttgatccaacagagaaggaagagaaagtgatggatggtaaa
atggtgattggaatgaataaataccgagagatttgtactctacagatggcaggtgacatg
ctgttgatgcatgaacagattctccgctgttccaatatagccgtagtcaaagttacagaa
ataacagagctgattcagaaggctttggaaaacgataagcaggctagagctactggtgcc
aagtttgggtttgcagaatctatggaacctcagattatcagcagtgattccagtgaatcc
attaagctgtgggtaagtcatattactaaattaagaattctctggaaagaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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