KEGG   Octopus bimaculoides (California two-spot octopus): 106873857
Entry
106873857         CDS       T04127                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta subunit 2-like
  KO
K02328  DNA polymerase delta subunit 2
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03030  DNA replication
obi03410  Base excision repair
obi03420  Nucleotide excision repair
obi03430  Mismatch repair
obi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106873857
   03410 Base excision repair
    106873857
   03420 Nucleotide excision repair
    106873857
   03430 Mismatch repair
    106873857
   03440 Homologous recombination
    106873857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obi03032]
    106873857
   03400 DNA repair and recombination proteins [BR:obi03400]
    106873857
DNA replication proteins [BR:obi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    106873857
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      106873857
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     106873857
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
Other DBs
NCBI-GeneID: 106873857
NCBI-ProteinID: XP_052831986
EnsemblRapid: LOC106873857
Position
23:6999113..7014263
AA seq 470 aa
MIFEKQNSINSAEKLLSAPSEDQEIFQRETCNYENKSERFHLKEFLYTRQFAHIYSSRLL
EMRPALERAAKEKWGECXPLIIRLRKLXXDEKCVIIGTLFKFMQLQPSIVKEISEEHNLL
PQPLQSNYTSDSDQLILEDELQRISLIGKLDVHKCCTGFVIAVFGHEPEDSRGKFQVEDF
CVQNLPLQLQRPVIEHDRYVAILSGLEIGSKEEKQFEIQMALDLITGKLGSVYQQENSSQ
IVRVIVAGNSLSKDTQDKDSISKAKYLTRNTAARSVDAMKSFDDVLLQLVTNVDVDLMPG
EYDPANYSIPQQPLHYCMFPKSHSYNTLHLVTNPYDCTIEGTRFLLTSGQTLDNIAQYSQ
LDDGMEILEKTLRWGHLAPTAPDTLACYPFRIQDPFIITETPHVYIAANQKEFQTKLIQG
ERNQAVRLITVPRFQAECSFVLVNLRTLDCEVIKLHNDISQTPASPQVDK
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgatttttgaaaaacaaaacagcatcaacagtgctgagaagttactttcagcgccaagt
gaagaccaggaaatctttcaaagagaaacttgcaactatgaaaacaaatcggagagattt
catttaaaggaatttctatacacccgtcagtttgcccatatttattcttcacgtctactg
gagatgagaccggcgttagaacgtgcagcgaaagaaaaatggggtgagtgttaaccactt
attataagactaagaaaactnnnnnncgacgagaaatgtgttattattggaactctgttt
aagtttatgcagcttcaaccaagcattgtgaaagaaattagtgaagaacacaacctgtta
cctcagccccttcagtcgaattatacctcagactcagaccagttgatattagaagacgaa
ctccaacgaatcagtctgattgggaaacttgatgtccacaaatgttgtacaggttttgta
attgctgtgtttggccatgaaccagaagattctcgtgggaaatttcaagttgaagatttc
tgtgttcaaaaccttccattgcaactccaacgtccagtcatcgaacatgacagatacgtg
gctattttgtctggtttggaaattggcagcaaggaagagaaacagtttgaaatacagatg
gcattggatctaataacagggaagttgggcagtgtataccaacaggaaaatagttcacag
attgtacgtgtgattgtggcaggtaattctctcagcaaggacactcaagataaggactca
atcagcaaagccaaatatttgacccgaaacactgctgctcgaagtgtagatgccatgaag
tctttcgatgatgtcttactgcaattagtgacaaatgttgatgtcgacttgatgcctggt
gaatatgatcctgccaactactccattccacagcagccactccattattgtatgtttcca
aagagccattcttacaacacattacacttggtaaccaatccttatgactgtactattgaa
ggcaccagatttttgttgaccagtggtcagacattggataacatagctcaatatagccag
ctggatgatggtatggaaatccttgagaaaaccctaagatggggccaccttgcacctaca
gcaccagatacattagcctgttaccctttccgtattcaagacccgtttatcatcacagaa
actccccatgtttatattgctgccaaccagaaagaattccagaccaaactaattcaaggt
gagcgtaatcaagcagtacgtctgataactgtccctcgcttccaagcagaatgttccttt
gttcttgtcaaccttcgaacacttgattgtgaggtgattaagcttcataacgacatatca
cagacgccagccagccctcaagttgataaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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