KEGG   Octopus bimaculoides (California two-spot octopus): 106874161
Entry
106874161         CDS       T04127                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:obi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obi03041]
    106874161
Spliceosome [BR:obi03041]
 Complex C
  Other components
   Complex C specific factors
    106874161
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC UTP25 zf-C2H2_10 FKBP_N
Other DBs
NCBI-GeneID: 106874161
NCBI-ProteinID: XP_014777272
EnsemblRapid: LOC106874161
UniProt: A0A0L8GXL4
Position
22:complement(4961675..4973351)
AA seq 645 aa
MDLSQKRKRFLEAEDESSSSSDDNYVPYITLNERKKENVQDLYKRMGISATKLMKSDKHL
GSTSASSSTNSINKLLLMQDENSEVLEDLDKKDIDEEEEICSGPKANISLLDQHSELKKK
AEARKETAREKMLKEEEKILESVAEKKALMGVAELARGIQYEEPIKTGWRPPRHILNMSE
QRHAKVRKKGHILVEGEDLPAPIKTFKEMKFPKAIINGLKKKGITKPTPIQIQGLPAVLS
GRDMIGIAFTGSGKTLVFTLPIIMFCMEQEKRLPFIKNEGPYGLIICPSRELARQTHEII
KYYCNCMELDGLPALRCALCIGGMPVKDQIELVKRGVHIMVATPGRLMDMLDKKMITLDV
CRYLCMDEADRMIDMGFEEDVRTIFSYFKAQRQTLLFSATMPKKIQNFARSALVKPVTVN
VGRAGAANLDVIQEVEYVKQEAKIVYLLQCLQKTPPPVLVFAEKKQDVDAIHEYLLLKGV
EAVAIHGGKDQEERTRSVEQFRNGQKDVLVATDVASKGLDFSDIQHVINYDMPEDIENYV
HRIGRTGRCGKTGTATTFINKTVDKSILLDLKHLLMEAKQKVAPFLATLQSESEKYLDIG
GEIGCSYCGGLGHRIADCPKLEALQTKQAQNIGRRDYLAHNAADW
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggatctttcacaaaagagaaagagattccttgaagcagaagatgaaagcagttccagc
tcagatgataattacgtaccatacattacgctcaatgaaaggaaaaaggagaatgtccag
gatctgtataaacggatgggaatcagtgctacgaaattaatgaagtccgacaagcacttg
ggttcgacgtcggccagcagcagcaccaacagcataaacaaactgcttctgatgcaggat
gaaaacagcgaagtcctggaggaccttgacaagaaagacattgatgaggaggaggaaata
tgttctgggccgaaagcgaacatcagtttgttggatcaacacagtgagctgaagaagaaa
gcagaagctcgaaaagaaactgcaagagaaaagatgctgaaagaagaggagaagattctg
gaaagtgtagcagaaaagaaagctttgatgggtgtggcagaacttgccagaggaatacaa
tatgaagaacccataaagactggatggcgccctccacgccatattttgaacatgtcagag
cagcgtcatgctaaagtgaggaaaaagggccacattttagttgaaggtgaagacctacct
gcccctataaagaccttcaaggagatgaaattccccaaggctatcatcaacggcttaaag
aaaaagggaatcactaaaccaacccctatacagattcagggcctacctgctgttttgtca
ggtcgagacatgattgggattgctttcacaggctctggtaaaacactggtattcactctg
cccattattatgttctgcatggaacaagagaaacgactgcccttcatcaagaatgagggc
ccgtatggcctcataatctgcccttcgcgggaacttgcacgacagactcatgaaataatc
aagtactactgcaattgtatggaactcgatggcctaccagccctgcgctgtgcgctgtgt
atcggaggtatgcctgtcaaagatcaaatcgaacttgtcaaaagaggtgtccacatcatg
gttgccacacctggtcggctgatggacatgctggacaagaaaatgataactctagatgtc
tgccgttacttgtgcatggacgaagctgatcgtatgattgacatggggttcgaagaagat
gtcaggacaatattttcttatttcaaggctcagagacaaactctactgttttcagccacc
atgccaaagaaaatccaaaactttgcccgcagtgcattggtgaagccagttacagtgaat
gttggtcgagctggcgccgccaacctcgatgttattcaggaagtggaatacgtaaaacaa
gaagcaaagattgtctatttactgcaatgtctccagaagacaccaccaccagtactggta
tttgctgaaaagaaacaggatgtggacgccatccatgaatatcttctactcaaaggagtc
gaggccgttgcaattcatggaggaaaagaccaagaagagagaactcgatcagtggaacaa
ttccggaacggtcagaaagacgttcttgtagcaacagatgtggcatcaaaaggccttgat
ttctctgacattcaacatgtcatcaattatgacatgccagaagacatagaaaactatgtc
catcgtattggccgtacaggaaggtgtggtaaaacaggtacagcaacaacattcattaac
aagaccgtggataaatcaattctgttggatctgaaacatttactgatggaagccaaacag
aaagtggcaccattcctggctacattacagtctgagagtgagaaatacctggacattgga
ggagaaattggttgttcttactgcggtggtttgggtcatcgtattgcagactgtcccaaa
ttggaagcacttcagaccaaacaagctcaaaatattggacgccgagactatttggcacac
aatgctgcagattggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (52)   

Download RDF
DBGET integrated database retrieval system