KEGG   Octopus bimaculoides (California two-spot octopus): 106874708
Entry
106874708         CDS       T04127                                 
Name
(RefSeq) probable glutamate--tRNA ligase, mitochondrial isoform X1
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi00860  Porphyrin metabolism
obi00970  Aminoacyl-tRNA biosynthesis
obi01100  Metabolic pathways
obi01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:obi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    106874708
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    106874708
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:obi01007]
    106874708
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:obi03016]
    106874708
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:obi02048]
    106874708
Enzymes [BR:obi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     106874708
Amino acid related enzymes [BR:obi01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   106874708
Transfer RNA biogenesis [BR:obi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    106874708
 Prokaryotic type
   Other AARSs
    106874708
Prokaryotic defense system [BR:obi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    106874708
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2 Imm-NTF2 Dna2
Other DBs
NCBI-GeneID: 106874708
NCBI-ProteinID: XP_014778014
EnsemblRapid: LOC106874708
UniProt: A0A0L8GU32
Position
4:complement(57516424..57543731)
AA seq 529 aa
MAVLTRFFHRFQLWNVYQFGKKCHLNTSVRWSHTNVRVRFAPSPTGFLHLGGLRSALYNY
IFAKSKGGTFILRIEDTDQTRLVPGALEKLQDILEWAGIMQDEGPRAGGKYGPYIQSERC
HIYREKIQILLENGSAYRCFCSNKRIELLRRAALSRGETPKYDNKCRHLTQKEIDAKMKD
NIPYVIRFKLKLNQTPWEDVVHGTIVNDIALVEGDPILIKSDQFPTYHFANVVDDHTMAV
SHVLRGVEWQSSTPKHIQIYEAFGWKPPVFAHMPLLVNKDGAKLSKRQRDIHVEHFKDQG
YYPESILNFICHVGGGFGTDQTAGMSFEDLISKFSLERLKKTPGRLEFDKIDRFNHETLI
QKIQGNERHEILQQVLKLVSEKYGSKFIENNDERSLQQYLEAVVDWAKVRINRIEDLLLP
EFKFIWVPPSFDDIKNLSSFSCNCQQVLESTIELLETDNHFKPETISKLLHNHVIELQLK
FKTYMHLLRYSISGRKEGPGVVEMISLLGQKQTVKRLKLCLEHIKLSQT
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggcggtgcttacaagattctttcaccgtttccagttgtggaatgtttatcagtttggg
aaaaaatgtcatttaaacacaagcgtgcgttggtcacatacaaatgtcagagtacgtttt
gctccaagtccaacaggatttttacaccttggaggtctacgctcagctctttataattat
atttttgctaaatccaaaggaggaacttttatacttcgaatagaagacactgaccagact
cgattggtacctggagcattggaaaaactgcaggacattttagaatgggcaggaataatg
caagatgaagggcctagagctggaggaaagtatggcccttatattcagtctgaaagatgt
catatttaccgggaaaagatacaaattctcttggagaatggaagtgcttatcgatgcttt
tgttcaaataagcgaatagaactgctaagaagagcagccctgagcagaggagaaactcca
aagtatgataacaaatgccgacacttaacacagaaagaaattgatgctaaaatgaaagat
aatattccatatgtcatacgtttcaaattaaaactcaatcaaactccatgggaagatgtt
gtgcatggaacaattgttaatgatattgctttggtagaaggtgatccaattcttataaaa
tctgaccagtttccaacttatcattttgccaacgttgtggatgaccatactatggcagtt
agccatgttttaagaggtgtggaatggcaaagttctacaccaaaacacattcaaatttat
gaagcttttggttggaaacctcctgtatttgctcatatgccacttcttgtaaacaaagat
ggtgccaaattatcaaagagacaaagagacattcatgtagaacactttaaagatcaagga
tattacccagagagtatccttaatttcatctgccatgttggtgggggatttggaactgat
cagactgcaggaatgtcttttgaggatttaatcagcaagttttctttagaaagactgaag
aaaactcctggtcgactagaatttgataaaattgatagatttaaccatgagacactaatt
cagaaaatccaaggaaatgagcgccatgaaattttacagcaagttttgaaacttgtcagt
gagaaatatggaagcaaatttattgagaacaatgatgaaagatctttgcaacagtatcta
gaagcagttgtcgactgggccaaagtgagaatcaatagaattgaggatttactcttacca
gaattcaaattcatttgggttccaccttcttttgatgatataaagaatctgtcttctttc
tcgtgtaattgccaacaagtgttagaatcaacaattgaactactagagactgataatcac
ttcaaaccagaaaccatttcaaaattacttcataaccatgtaatagaattacagctgaaa
tttaaaacttacatgcatctgctgcgatattctattagtggtagaaaggaagggcctggt
gttgtagaaatgatttctcttcttggtcaaaagcaaactgtgaaaagattaaaattgtgc
ttagaacatattaaattgagccagacatga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (62)   

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