KEGG   Octopus bimaculoides (California two-spot octopus): 106875419
Entry
106875419         CDS       T04127                                 
Name
(RefSeq) RNA binding motif protein, X-linked-like-1 isoform X1
  KO
K12885  heterogeneous nuclear ribonucleoprotein G
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106875419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obi03041]
    106875419
Spliceosome [BR:obi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    106875419
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5 RRM_occluded
Other DBs
NCBI-GeneID: 106875419
NCBI-ProteinID: XP_014779037
EnsemblRapid: LOC106875419
UniProt: A0A0L8GQR8
Position
19:53971859..53993580
AA seq 530 aa
MVEKDRPGKIFVGGLSPEVDEKLLENLFGKYGKIIEILIIRDKESRQSRGYAFVTFENPL
DAEDAVKAVDGIELKGREIHCEQAILPQALERNRRGPPPSRGSRGRPSLLLRTAREKLSK
ARRGGFAGKPIRGRPIGSSFRGGPPGRLRPSGRGGPPGHFSPPSLRGRGPPSPPIVSSRS
MFRDSSRGPPISSRVPRDLSPRSGPPRRGIPRSMDSPPRRSSFDDEYNSPPYWEKSGRSD
RLSMGVPERGPLRSRDFHPAPSPPREMRREYRSEREFREFSPRDFDRPSFREKISSRMVF
STNDGALRTADRGEYISSDRDLGSSRSSRDYISPRYDDLDREYSSRNFVSREHTSSTSRG
SRSYGSSRESGRSFSSHNYDRGVDLSPREYDSYRSYGPRDTPNPNRGPPSRSYSSYGPSS
STHRSYISSSSRGGPSSSCGPPPSMSSRGPAPPISSRGPPLSSRGPPPMSSRGPPMSRRG
SIGSDQRGEYSREVYPSGSRRPAPQDSRGPSAKRPRGADGPSRSGPPFRR
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggttgaaaaagacaggcctggaaaaatatttgtgggtggcctcagcccagaggtcgat
gaaaaattgttagaaaatctatttgggaaatacggcaagattattgaaattctcattatt
cgagataaagaaagtcgtcaatctcgaggctatgcttttgtcacttttgaaaatccattg
gatgcagaagatgcagtcaaagctgttgatggcatagaattgaaaggccgtgaaattcat
tgtgaacaagcaattcttcctcaagctctggagagaaataggcgtggaccaccaccatca
aggggttctcgtggaagaccatctttacttctgagaactgctagagaaaagctgtcaaaa
gccagaagaggtggttttgcagggaagcccattcgtggaaggcctatcggaagttcattc
cgaggaggtcctccaggaagattgcgtccatcagggagaggtggacctccagggcatttc
tcaccaccctctttaagaggaagaggcccaccttcaccaccaattgtaagctctcgaagt
atgtttagagattcttctcgagggccaccaatatcatcacgtgttcctcgtgatctctct
cctcgcagtgggccaccaagaagaggcatacctagaagtatggattcacctccaagaaga
tccagctttgatgatgaatacaattccccaccttattgggaaaagtcaggccgaagtgac
cgattgtctatgggtgtacctgaaagaggaccccttcgcagcagagattttcatcctgca
ccatctccacctagagagatgaggcgagaatacagaagtgaaagggaattccgagaattt
agccccagggattttgatcgtccttcattccgtgaaaagatatcttcaagaatggtgttc
tctaccaatgatggcgctctgagaactgcagatagaggagaatatatatcgtctgatcgg
gatttgggttcttcacgttcaagccgagattacatttctccaagatatgatgatctggac
agagagtattccagtcggaattttgtatctagagaacacacgtcttccactagtcgtggt
agtcgatcatatggttccagcagggaatctggtcgtagtttctctagccataattatgac
agaggtgtggatctctctcctcgtgagtacgactcctacagaagttatggccctcgtgac
actccgaatccaaacagaggacctccatcacgcagttactcttcctatggaccttcttcc
agcacacatcgcagttatatatctagcagttcacgaggagggccatcttcatcctgtggc
ccacctccaagcatgtcctcaaggggcccagccccgcctatctcttctagaggaccacca
ctctcctccagagggccaccacctatgtcatctcgtggtccacctatgtctcgcagaggc
tccattggcagtgatcaacgtggagaatacagtcgagaagtctatccttctggaagtcgc
cgccctgctcctcaggactctagaggtccctcagccaaacgtccgagaggtgcagatgga
ccatcaagaagtggaccgccattcaggcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (89)   
   KEGG ORTHOLOGY (1)   
   RefGene (84)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (104)   

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