KEGG   Octopus bimaculoides (California two-spot octopus): 106877343
Entry
106877343         CDS       T04127                                 
Name
(RefSeq) collagen alpha-6(VI) chain
Organism
obi  Octopus bimaculoides (California two-spot octopus)
SSDB
Motif
Pfam: VWA VWA_2 VWA_3 VWA_CoxE Copine vWA-TerF-like
Other DBs
NCBI-GeneID: 106877343
NCBI-ProteinID: XP_052826278
EnsemblRapid: LOC106877343
Position
9:complement(10680833..10699772)
AA seq 1021 aa
MAPFLLFAVSLTLFQLGNALPFMKELSECDNPADIVFLLDCSTSMYPSQFKQQLAFVNNF
TESMDIDNGTIRIAVVTFSTTVQTEFNLNKYKTKAELQKAVSDILYLGGRTHTWLALDHI
RQEIFTTDNGGRIGVPKIVIMITDGGSNEKKKTIEAAKILHKDPLRVFTIGIGPSVDTDE
LKAIASKPSNIFQIEKFDALKALTSEIIKNVCIKVCGVNPSDIIFLLDESTSIYDDDFGI
QLSFLISFIRDSLIGINATQIGVVTFSSNVIYRIKLNQFSKSHDLENAVLSIKRNHGDTN
TGDALKLIREEGFSKANGGRDGVPHILIVITDGQAQSPTKTARESKAIHKTDIVVFTIGI
GQAVDPAELRMIAGSDDKVFRTASYSTLKTIHKSLFKKVCRVEVIKLKPTTMIMRFVTIY
LAVLATSVVIAHRIGVDSNLKSFVSPYEEILCQDPADIVFVLDSSRSVTQTDFKKELDFV
SSFVNDMDIGADKIRIGVVTFSDNVKTEFELKEFSHKQDIQNAVSNIAHRSRSTNTWLAL
KHIRTESFITDHGGRVGIPKIAILVTAGGSNGKSKTLNEAKLLHNDPIRIFTVAVGNRVD
DDELRAIASKSENAFKVPDFNSLATIEDKVKQNFCRKGEIFCHNPADIVFVLDSSVSVTQ
TDFKKELDFVSSFVNDMDISSDKIQIGVVTFSDNVKTEFELNKFSQKQDIQKAVSSIAYR
SGSTNTWLALKHIRTESFTTDHGGRVGIPKIIILVTASGSNGKSKTLNEAKLLHNDPLRV
YTVAVGNRVDDDELRAMVSKPESILKVKDFNSLSTIRNTLKQKVCKRVCGVVPSDIIFVA
DASTSIWDADFKKQMDFIISFVKDTVVGRNNTQIGMVSFSTNVINHFYLNAKTSRAAVIS
ALKGLKQSHGDTYTSKALRFIRTQAFLPSNGGRPDVPHIIIVITDGQSTTPQDTLKEAVK
LAQNNIIAFTIGVGKQVDLNELRVIAGDSSRMFEVANYDTLHTIEKKLFSKVCKVEISQQ
V
NT seq 3066 nt   +upstreamnt  +downstreamnt
atggctcctttcctgcttttcgctgtgtctctgacgctcttccagcttggcaatgccttg
ccatttatgaaagaattatcagaatgcgataacccagccgatatcgtttttctcctagat
tgctctactagcatgtatccttctcaattcaaacaacaattagcttttgtgaataatttt
actgaaagtatggatatcgacaatggaaccattagaatagcagtggtcaccttcagtacc
actgtccagacggaattcaatttgaataaatataaaactaaagcagaattacaaaaggct
gtttcagatattttatatcttggtggcaggactcacacttggttagcattggatcatatc
cgtcaagaaatattcactacagacaatggaggacgaattggtgtgcccaaaattgttatt
atgattactgatggcggatctaatgaaaagaagaaaactatagaagcagccaaaatccta
cataaagatcctcttcgagttttcactattggcatcggaccaagtgttgatacggatgag
ttgaaagctatagcatcgaaaccatccaatatattccagatcgagaaatttgatgccctt
aaagcattaacatctgaaattattaaaaacgtttgtatcaaagtgtgtggagtgaatcca
tctgatattatctttctgttagacgagtcaaccagtatctatgatgatgatttcggaata
cagctaagtttcttgatttcgttcataagagacagtctaattggcattaatgccacacaa
atcggagtggttacattcagcagcaacgttatatatcggataaaactgaaccagttttca
aaatcgcatgatctggagaatgctgttcttagtattaaacggaaccatggcgatacaaac
actggagatgcactgaaacttattcgcgaggaaggctttagcaaagcaaatggcggccgt
gatggtgtgccgcatattctcattgtcattacagatggacaagcacagagtccaacgaag
acggctcgtgagtctaaagctatccataaaacagatattgtggtctttactattggaatc
gggcaggctgtggaccctgcagagctacgaatgattgcaggttcagatgataaagtgttc
agaactgcaagttattctactttaaagaccattcataaatctctttttaagaaagtttgt
cgcgttgaggtcattaaattaaaacccaccacaatgataatgcggtttgttaccatttac
ttggccgttttggcaacatctgtggtaattgcgcaccgcattggtgtggacagcaacctg
aaatcatttgttagtccatatgaagaaatactctgtcaagaccctgctgatattgtattt
gttctcgatagttccagaagtgtaacccaaacagactttaagaaggagctcgatttcgtc
agttcattcgtaaatgatatggacattggtgcggacaaaattcgaatcggtgtggtcacc
ttctcagataatgtcaaaactgagtttgaactgaaagaattttcacataaacaagacatt
cagaatgctgtttctaatattgctcaccgcagtcgatcaaccaacacttggctagctcta
aaacatattcggacagaatcttttataactgaccatggtggaagagtgggaatacctaaa
attgctattcttgtaactgcaggtggttccaacggaaagagcaaaacactaaacgaagcc
aaacttcttcataatgatccaattagaatttttacggtagctgtggggaacagagtcgat
gatgatgagttgagagcaatagcatcaaaatcggaaaatgcttttaaagtgccggacttc
aattccttggctacaatcgaagacaaagtaaagcaaaatttctgtagaaaaggagaaata
ttctgccacaaccctgctgatattgtatttgttctcgatagttctgtaagtgtaactcaa
acagactttaagaaggagctcgatttcgtcagttcattcgtaaatgatatggacattagt
tcggacaagattcaaatcggtgtggtcaccttctcagataatgtcaaaactgagtttgaa
ctgaacaagttttcacaaaaacaagacattcagaaagctgtctctagcattgcttatcgc
agtggatcaaccaacacttggctagctctaaaacatattcgaacagaatcttttacaact
gaccatggtggaagagtgggaatacctaaaattattattcttgtaactgccagtggttcc
aacggaaagagcaaaacactaaacgaagccaaacttctccataatgatccacttagagtg
tatacggtagctgtgggaaacagggtcgatgatgatgagttgagagcgatggtatcgaaa
ccagaaagcattttgaaagtgaaagatttcaattccctctctacaatcagaaatacattg
aagcaaaaggtgtgcaaacgagtttgtggtgtcgtaccttctgatataatatttgtggca
gacgcatctaccagcatttgggatgcagacttcaagaagcaaatggactttataatcagt
tttgtcaaggacacagttgtcggacgtaacaacacgcagattggcatggtatctttcagt
accaatgtgataaaccacttttacctaaatgctaaaacgtcgcgagccgctgtgatttca
gccttaaaaggacttaaacaatctcatggtgacacttatacgtcgaaagcactgaggttt
attcgaacacaagctttcttaccgtctaatggcggtagacctgatgtaccacacatcata
attgttattaccgacggccaatcaacaacgccccaggatactctgaaagaagctgtgaaa
ctagcacaaaataacatcatagcttttactattggtgtaggtaaacaagtcgacttgaac
gaactgagagtcattgcaggtgacagctcaagaatgtttgaagtagctaactatgataca
ttgcatactatagaaaagaagcttttctcaaaagtctgcaaagttgaaatatcgcagcag
gtataa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (84)   
   RefGene (80)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (93)   

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