KEGG   Octopus bimaculoides (California two-spot octopus): 106879631
Entry
106879631         CDS       T04127                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03020  RNA polymerase
obi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106879631
  09124 Replication and repair
   03420 Nucleotide excision repair
    106879631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obi03021]
    106879631
   03400 DNA repair and recombination proteins [BR:obi03400]
    106879631
Transcription machinery [BR:obi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     106879631
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106879631
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 106879631
NCBI-ProteinID: XP_014784778
EnsemblRapid: LOC106879631
UniProt: A0A0L8G249
Position
17:complement(5163645..5185077)
AA seq 274 aa
MPYANRPVVSISQLTDENIKFVLEDTDLSSANALRRVCIAEVPTMAIDWVQMEANSSVLF
DEFISHRIGLIPLTSDEVVDKMVYSRDCACEDFCSECAVEFTLDVKCLDDQTRHVTTADL
ISKNPKVVPVTSRHREEASEYEETDDILIVKLRKGQELKLRAFARKGFAKEHAKWNPTCG
VAFEYDPDNALRHTLLPKPEEWPRSEYSELEPDDPPQAPFDPSGKPNKFYYNVESCASLR
PENIVFSAIAVLKKKLSDLQTQLSQEMQGDALRI
NT seq 825 nt   +upstreamnt  +downstreamnt
atgccttacgccaatcgacctgttgtaagcatctcacagcttactgatgagaatatcaaa
ttcgttttggaggacacagacctcagctccgccaatgctcttagacgagtatgtatagca
gaagtacctaccatggccattgactgggtccagatggaagccaattcctcggtattattt
gatgagtttatatcccatcgtattggtctcattcctctcaccagtgacgaagtggtggac
aaaatggtttattctagagattgtgcatgtgaggacttctgtagtgaatgtgctgtagag
tttactctggatgttaaatgtcttgatgaccagacaaggcatgtgaccacagcagatctg
ataagtaagaaccccaaagttgtaccggtaacttccagacatcgtgaagaagcaagtgaa
tatgaagagacagatgatattcttattgtaaaacttcgtaaaggacaagaactgaagcta
cgagcttttgctcgtaaaggttttgccaaggagcatgccaaatggaatccaacttgtgga
gtcgcctttgaatatgatccagacaatgctttacgccatactctgcttcccaaacctgaa
gaatggcctcgaagtgaatacagtgagcttgaacctgatgatcccccccaagccccattt
gacccttctggaaaaccaaacaaattctactacaatgtggaatcatgtgcttcattgcgg
ccagaaaatattgttttttcagccattgcagtcctgaagaagaaattgagtgatttacag
acacaactcagtcaagaaatgcagggagatgccctgcgaatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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