KEGG   Octopus bimaculoides (California two-spot octopus): 106880678
Entry
106880678         CDS       T04127                                 
Name
(RefSeq) nuclear valosin-containing protein-like
  KO
K14571  ribosome biogenesis ATPase
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106880678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:obi03009]
    106880678
Ribosome biogenesis [BR:obi03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    106880678
SSDB
Motif
Pfam: AAA AAA_lid_3 Nucleolin_bd AAA_2 AAA_16 AAA_5 AAA_14 RuvB_N TIP49 AAA_22 AAA_18 AAA_25 Rad17 Mg_chelatase AAA_28 Zeta_toxin nSTAND3 RNA_helicase AAA_33 AAA_17 ABC_tran NACHT IstB_IS21 ATPase TsaE
Other DBs
NCBI-GeneID: 106880678
NCBI-ProteinID: XP_052832618
EnsemblRapid: LOC106880678
Position
25:31536487..31553414
AA seq 938 aa
MVNWKTRSTMSSKKKSLSGKESQYFMDPKLIPRVRQYLSNHSSLKSFSVGTMARELQIMY
GDYARKKRIAFLKSVEKAYQIICDDDHSSEEGDDFTMQLEKKHLLNKSNYKYADDCIDIE
SDTTDKSFSSDNTDYVSFKDTNMMNNFMTKVYQGHSKKPLKDDKNASSFMEVSPHPKTTA
LPQTTPHFKSSQPSPSSSSISSYLHLQNGIPSSLTVNSPLGLHQHTPQQQQISPALPPTS
SSSYVGGSTPLVTTTPKTSLHSMPKSFKNHHSYSADSFRHVKGQKSSSTIPNSSRMPLAK
SVERKKKILVRTPDERGSGEKTPMDVSATTPRLKRIRSSESKYYESEQKPTKNDDYGFQY
STVTFADVGGNEKCLMLFFLYQELEVPFLKLAATELVSGVSGESEQKMRQIFEKARTNAP
CILFFDEIDVITPKRETASKDMERRIVAQLLTCLDDLNDVKKSPDNVLVIGATNRPDSLD
PALRRAGRFDREISLGIPDKIARQRILQVLCKNLKLSDNFNYSQLAHMTPGFVGADLSAL
SREAAMVAINRVFKEIQNKKKLKMDTEPTKMDQSINNSLKTNNELECSTEFGISSGPLWA
MPAVSFMSEELLLALSWLREEPPLSPAELESVFITMDDFMEAVKLVQPSAKREGFATIPD
VTWDDIGALHNIREDLKLAILAPVKYPERFKSLGLTRAPGILLAGPPGCGKTMLAKAISN
ESGINFISVKGPELLNMYVGESERAVRQVFQRARNSSPCVIFFDELDSLCPRRSESGEGG
ASARVVNQMLTEMDGLEERKQVFVIAATNRPDIIDPAILRPGRLDKTLYVSFPSESDRLD
ILRTITKDGAKPKLSDKSLLETIAKDTRCTGFSGADLSSLICEASVSAMKESITNCPHED
SKNFPVVTVTDKHIEIAFSKVKPSVSTKDRQIWLGKQL
NT seq 2817 nt   +upstreamnt  +downstreamnt
atggtcaattggaagactcgttccacgatgagctccaagaagaaatccctgtccggcaag
gaatcgcagtactttatggaccctaaactgataccccgggttcggcagtatttgagcaat
cacagttccttgaaaagcttcagcgttggtacaatggctcgagagttgcagataatgtat
ggagattatgccagaaagaaacggatagcctttttgaaatctgtggagaaagcttaccaa
atcatctgtgatgatgatcactcctctgaggaaggggacgactttacaatgcaactggag
aagaaacatcttttaaataaatcaaactataagtatgcagacgattgtatcgacatagag
agtgacacgacagataagagtttctcttctgataacacagattatgtctcctttaaggac
acaaatatgatgaataattttatgaccaaagtatatcaaggacattctaagaaacctctg
aaagatgacaagaatgcatcatcatttatggaagtctcccctcatccgaaaacaactgct
ctaccacagaccactccacacttcaaatcatctcagccttcaccatcatcatcatcaata
tcatcttatttacatttacagaatgggattccatctagccttactgtaaattcaccgctg
ggtttgcaccagcacactccacaacagcagcaaatctcacctgccttgccaccaacttcg
tcgtcatcatatgtggggggcagtacgcccctagtgacgaccactcccaaaacttcattg
cactcaatgccaaagtctttcaagaaccatcattcatactctgctgattcatttcgtcat
gtaaagggacagaagtcgtcgtcgaccatccctaacagcagtcgaatgccacttgctaaa
tcggtagagcggaaaaagaagattttagtgagaactcctgatgaacgtggttccggtgag
aaaacaccaatggatgtcagtgctacaaccccacggttgaaacgaatacgaagtagtgag
tcaaaatattatgaatctgaacaaaaaccaaccaaaaatgatgattatggtttccaatat
tctacagtgacatttgctgatgttggcggcaacgaaaaatgtctgatgcttttttttttg
taccaggaacttgaagtgccattcttaaaattagctgctacggagcttgtttccggggtg
tcgggagagtctgaacaaaaaatgcgacagatttttgagaaagccagaaccaatgctcca
tgtatattgttcttcgatgagattgatgtgataactccaaagagagagaccgcatccaaa
gatatggaacgacgaattgtggctcaactgttaacctgtcttgatgacttgaatgatgta
aagaaatctcctgacaatgtcttggttattggtgctacgaatcggccagactcattagac
cctgctttacggagagccggcaggtttgatcgagaaatctctttaggaattcctgataaa
atagccagacaaaggattctacaggtgctctgcaagaacctaaagctgtctgacaacttc
aactattcccaactggcccacatgactcctggttttgtcggagctgatcttagtgccttg
tcgagggaagcagccatggttgctataaacagggtttttaaagaaatccaaaacaaaaaa
aaactaaaaatggacacagagccaacaaaaatggatcagagtattaacaactcactgaag
acaaacaatgaattagaatgttctacagagtttggtattagcagtggtcctctatgggcc
atgccagctgtatccttcatgtccgaagaactgttgttagctctcagctggctcagagaa
gaacctcctttatctcctgccgaactagaaagcgtttttattacaatggacgattttatg
gaagcagtgaaattagttcaaccctcagccaagcgagaaggttttgctaccattcctgat
gtcacatgggacgacattggtgcattgcataatattcgtgaagatttgaagcttgctata
ttggctcctgttaaatatcctgaaagattcaagtcccttggtttaacaagggctcctgga
atcttattggctggacctcccggctgtggaaagacaatgttagctaaagccatttctaat
gaatcgggaataaatttcatatctgtcaaaggaccagaattgcttaatatgtatgtcggt
gagagtgaacgagctgtccgccaagtctttcaaagagccaggaattcttctccctgcgtc
attttctttgatgaattggactccttatgtcctcgaagatctgaaagcggcgagggtggt
gctagtgctcgggtagtcaaccagatgttgacagaaatggacggtcttgaagaaagaaag
caagtattcgtgatagcagccacaaacagacctgatattattgatcctgcaattttacga
cctggtcgattggataaaaccctttatgtgagttttccttctgaatctgacagacttgat
atactccggacaattacgaaggacggtgccaaaccgaagctgagtgacaaatctctcctg
gagaccattgctaaggacactcgctgtactggtttctctggtgctgatctttcctcgttg
atatgtgaagccagtgtcagtgccatgaaagaaagcatcacgaattgtccacatgaagac
tccaagaacttccctgttgtcacggtaaccgacaaacatatagaaattgccttctcgaaa
gtgaaaccttcagtttcaacaaaggatagacagatttggttgggaaaacagttataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (25)   
   Pfam (25)   
All databases (79)   

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