KEGG   Octopus bimaculoides (California two-spot octopus): 106882472
Entry
106882472         CDS       T04127                                 
Name
(RefSeq) X-ray repair cross-complementing protein 6
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    106882472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obi03041]
    106882472
   03400 DNA repair and recombination proteins [BR:obi03400]
    106882472
Spliceosome [BR:obi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    106882472
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     106882472
SSDB
Motif
Pfam: Ku_N Ku Ku_C SAP Rho_N HTH_21
Other DBs
NCBI-GeneID: 106882472
NCBI-ProteinID: XP_052825075
EnsemblRapid: LOC106882472
Position
7:complement(5038798..5057594)
AA seq 562 aa
MDSYHFGFKDDLEDEDVAEEKIIYNSKDGMIFLIDCNKSMFSDDDENFFTTCIQCVQSTL
KNKIIQNNRDLVGVVFFGTDKTKNTDNFEHIYIYQDLARPNAERIIEIENMLTDNWKTFH
EDYGHNSNYQMSDVFWLCSLLFSKCTEKLGYQRILLFTNKDEPHMDKTEIVHCKTRANDL
NKTGISLELLPLQLPNQTFDVNKFYKNILFIIHGEEIEQLPDTTEKLEGLLERVRCKERQ
KRVLRRLPLRIGDGVEATVAKQAIPRSKNYSLSTFKNILQDTGETLMPQDIKYAKKYGNR
TATFEKEEVTKMRMFGEPGFKLLGFQQQKDVKTHYHIKPTHFIYPEEKSLSGNTCLFSAL
LDRCLQRGVAPICEYISSKTSAPEYVALLPQHYWVVVFAFFSAEDKQIDLAKDIIKSLKI
KYNFTHFDNPPLKYHWMHIESRVLDKESSDEFVDNTLPDTKAMDKKAGEAIKNFKEAVFH
EDYNPDNKKKRTGGSDATKKTASSKRPLTDKDLKVFWMGHQLEQLKVADLERLMKENGIK
CSTKRKKDLIDAINNHYGGSNS
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggactcttaccattttggattcaaagatgaccttgaagacgaagatgttgctgaagaa
aaaattatttacaattctaaagatggaatgatctttctaattgattgcaacaaaagcatg
ttctcagatgatgatgagaatttcttcacgacatgcatacagtgtgtccaatccacgtta
aaaaacaaaattattcaaaataatcgtgatcttgttggtgtcgttttttttggaactgat
aagaccaaaaatactgacaattttgaacacatatatatttaccaggacttggctcgtcct
aatgctgaaagaattatagaaattgaaaatatgcttactgataactggaagacgttccac
gaggactatggacacaattctaattatcaaatgagtgatgtattttggctgtgctcgctt
ttattctcaaaatgcactgaaaaacttggatatcagagaatcttgcttttcacaaataag
gatgaacctcacatggataaaacagaaattgttcattgtaaaactcgtgccaatgatctc
aataaaacaggaatatctctggagctgttgcccttacaacttccaaatcagacctttgat
gtcaataagttctacaagaatattttgtttatcattcatggagaggaaattgaacagttg
cctgacacaacagaaaaactggaggggttgttagagagggtgagatgtaaagagcgtcaa
aagagggttctacgtaggttacccctacgaattggtgatggtgttgaagcaacggttgca
aagcaagctatcccaagatctaagaattattcacttagtacttttaaaaatattcttcag
gatactggtgaaactcttatgcctcaagacatcaaatatgccaagaaatatggcaacagg
actgctacatttgagaaagaggaagtcacgaaaatgcgcatgtttggtgaaccaggattc
aaactcctgggttttcagcaacagaaggatgtgaaaacacattaccatattaaaccaaca
cacttcatatatcctgaagagaagtctttaagtggcaacacttgccttttctcagcttta
cttgaccgatgtttgcagcgaggtgttgcaccaatttgtgaatatatatcatctaaaaca
tctgctccagaatatgttgccttactgccacagcattattgggttgttgtttttgctttc
ttctcagctgaagacaaacagattgatttggccaaggacatcatcaaatcacttaaaatc
aaatacaacttcacccactttgacaatcctcctctgaagtaccattggatgcatattgaa
agcagggttcttgacaaggaatcgtctgatgaatttgttgataatacattaccagacact
aaggctatggataagaaagctggagaggcaataaaaaatttcaaagaagctgtgtttcat
gaagattacaacccagacaacaaaaaaaagagaactggaggaagcgatgctaccaaaaag
acagcctctagtaaacgtccacttactgacaaagacttgaaagtattttggatgggtcat
cagttggaacaacttaaagtggctgaccttgaaagactgatgaaagagaatggtattaaa
tgttctacaaagagaaagaaagatttaattgatgctattaacaaccattatggtggtagc
aactcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (47)   

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