KEGG   Ooceraea biroi (clonal raider ant): 105278025
Entry
105278025         CDS       T05778                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105278025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obo03041]
    105278025
   03400 DNA repair and recombination proteins [BR:obo03400]
    105278025
Spliceosome [BR:obo03041]
 Complex B
  Other components
   Prp19 complex
    105278025
 Complex C
   Prp19-CDC5 complex
    105278025
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    105278025
SSDB
Motif
Pfam: BCAS2 NPV_P10 DUF6270 Sirohm_synth_C CC149 Cep57_CLD
Other DBs
NCBI-GeneID: 105278025
NCBI-ProteinID: XP_011335120
Position
1:complement(18682404..18684028)
AA seq 247 aa
MAGEVIVDALPYIDQGYDEPGVREAALAMVEEETRRYRPTKNYLEHLQPLSLTAFETEVL
KHEFERMQNRLPMEVLSMKRYELPPPPFTKLNDVDAWNESVENSSAQLEHQATRICNLEL
MMDYGCEAWKSYLEVLVQLVGEAQKQLQMLRKMIQEVNWQRKSMQTQGGDKLRALESQWV
GLVSKNYEIEQACAHLEEQMQTMTSMSKEAVEINDVPSAEEGPDVPEKSATETMAFQMQQ
QEDEDDA
NT seq 744 nt   +upstreamnt  +downstreamnt
atggctggagaagtgattgttgacgctctgccgtatattgaccaaggatatgacgaacct
ggtgtgcgagaagcggcgttagcgatggtggaggaggagacacgccgatacagaccgacg
aagaattacctggagcacctgcagccgctgagcttgaccgcattcgagacggaggtgcta
aagcacgagtttgagaggatgcagaatcgcctgccgatggaggtgctcagcatgaaacgt
tacgagttgccaccacctccgttcaccaagctaaacgacgtggatgcgtggaacgagagt
gtggagaacagcagcgcgcagctggaacatcaagctacgagaatctgcaatttggaactg
atgatggattacggttgtgaggcgtggaaatcttacttggaggtactggtgcagctggtg
ggcgaggcgcagaaacaactgcaaatgctgaggaagatgatccaggaggtgaactggcag
aggaagtccatgcagacacaagggggggataaactgcgcgctttggagtcgcagtgggtc
ggcctggtgtcgaagaattacgagatcgagcaggcgtgcgcacacttggaggagcagatg
cagacgatgacgtcgatgagcaaggaggctgtggagatcaacgatgtgccgagtgcggag
gagggacccgatgtgccggaaaaaagcgccacggagacgatggctttccagatgcagcag
caagaagatgaagatgatgcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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