KEGG T05778: 105280434

Ooceraea biroi (clonal raider ant): 105280434

Entry

105280434         CDS       T05778

Name

(RefSeq) elongation factor-like GTPase 1 isoform X1

K14536

ribosome assembly protein 1 [EC:3.6.5.-]

Organism

obo Ooceraea biroi (clonal raider ant)

Pathway

obo03008

Ribosome biogenesis in eukaryotes

Brite

KEGG Orthology (KO) [BR:obo00001]
09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    105280434
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:obo03009]
    105280434
Ribosome biogenesis [BR:obo03009]
Eukaryotic type
  Pre-60S particles
   GTPases
    105280434

SSDB

Motif

Pfam:

GTP_EFTU EFG_C GTP_EFTU_D2 EFG_III EFG_IV MMR_HSR1

Other DBs

NCBI-GeneID:

105280434

NCBI-ProteinID:

XP_011339301

Position

1:3668351..3700229

AA seq 1076 aa
MCTNTLTVSRCRDYDFAHSLNLTMRRITVERFNDIQADTKRIRNICILAHVDHGKTTLAD
SLVASNGIISHKLAGKLRYLDSRPDEQIRGITMKSSSITLYHMYNETDHVINLIDSPGHV
DFSSEVSTAVRLCDGALIIVDVVEGVCPQTRSALSIAYIEGLKPILVLNKIDRLITEMKL
TSLDAYIRLTQVLEQVNAITGELFASDIMEREDREKTVTSRSDKVNERDLADWQSMLEEV
DDSNLYFSPEQGNVLFTSAIDGWGFSIKEFAKIYSNKLGFSERVLCKTLWGDFYLNNKTK
RIMKGAQEKAKKPLFVQLILDNIWLLYETVVIRKDKNKLLAMTEKLNVKLSTRDMRHTDP
RVQLQAVYSQWLPLAQICLDMVCEEIPAPHNLTSEKIERLLSGNGDFSALPPETQQLKTT
FLSCDPRQASVIVFVSKMFPVDRDMLPENRLKLLTAEELSEKREIVRQRHRERLMQKPVE
NQEGGTCNTSYNNDEDAKHEEEEVTDKSDSILVAFARIYSGTIKIGDELYVLGPKHDPGV
ALERERAGERIDPSLVLKDLKPGRHVTKVTIGKLYTLMGRELVAVNEIPAGNVFGIGGLE
EHVLKTATLSTTIACPSFTELTSLAVPILRVALEPTHPNDLPKLISGLKLLNQADACALV
HMQENGEIILSTIGEVHLERCLEDLKLKYAKIDINVSEPIVPFRETIVPPPKLDMMNEAI
EKKKTDHVSLELWTYNRQCRFEIDAKPLPENVTKLLEKNAKLIKLLDSYCDKSIEENGEH
ESLFFDESQPNEKSISDRKQKKIKIFKNELEAAFLEAGWRGNVLDKIWSFGPRKCGLNIL
LNETDYKQKKFWEQRSTNIDPRAIYDSNIVNGFQLATLAGPLCEELMMGVCFILKKWEIF
DSSHSDYSSSQGNLSGQLMSACKDGCRRIFSLRHARLMTAMYSCSVLSNSDVLGKLYAVF
GKRQGRIISAENAHGFGGQFRVLATLPVLESFHLARELRTQTSGLASPQLVFSHWEVIEQ
DPYWVPSTEEEYLHFGEKADSDNRAKCYMDAVRRRKGLPVSSQVVIHAQKQRTLKR

NT seq 3231 nt +upstreamnt +downstreamnt
atgtgcaccaatacgctcactgtttctcgttgccgcgattacgatttcgctcatagttta
aacctaacaatgcgtcgtatcactgtggagaggttcaacgatattcaagctgataccaag
cgtatcaggaatatttgtatactggcacacgtagatcatgggaagaccactctggcggat
tctctcgtcgcgagtaacggtatcatctctcacaaattggctggcaagcttcgctatttg
gacagtaggccggatgaacagatacgtgggatcacaatgaaatccagctccataacgctc
taccatatgtacaacgaaacggatcatgtgataaatttaattgactccccagggcacgta
gacttctcctccgaggtatcgacagccgtcaggctctgtgacggagctctcatcatagtc
gatgtagtggaaggcgtatgtcctcagacacgtagcgccctatctatagcgtatatcgaa
ggtctgaagcctattttagtacttaataaaatagacagattgatcacggaaatgaaattg
acatcgttggatgcttacatccgtttgacgcaagtcttggagcaggtaaatgctattacg
ggagagctgttcgcgagtgatattatggaacgcgaggacagagagaagacagttacaagc
cggtcggacaaggtgaacgaaagagatttggccgattggcaatcgatgttggaggaggta
gacgactcgaatttatatttctccccggagcaaggaaacgttttatttactagtgcaatt
gatggctggggatttagtataaaagaatttgccaagatttattcaaataaattaggattt
agtgagagagttctgtgtaaaacgttatggggagatttttacctgaacaacaaaaccaag
aggatcatgaaaggagctcaagaaaaagcgaagaaaccgctctttgtgcaacttatttta
gacaatatttggctactgtacgagactgtggtgatacgcaaagacaagaataagttgctg
gccatgactgaaaagttgaatgttaaattgtcaacgcgagacatgagacacacggacccg
agagtacaattgcaagctgtttactcgcagtggcttcccctagcacaaatttgcctggac
atggtatgcgaggagattccagcaccacataatttaactagtgaaaaaattgaacggttg
ttaagtggaaacggcgatttctcagcactacctcctgagactcaacaactcaaaaccaca
ttcctatcgtgcgatccgcggcaggcgtcggttatcgtattcgtgtcgaaaatgtttcca
gtagatagagacatgctgcctgagaacagactgaaactattgacagcggaggaattgtca
gagaaaagagagatcgtccgacagaggcatcgggagcggttgatgcaaaaacccgtagag
aatcaagaagggggtacgtgcaatactagctataataacgacgaggacgcgaagcatgaa
gaagaagaggtcactgataaatcggacagcatattggtagctttcgccaggatatactcg
gggactataaagatcggcgatgagctgtacgtcctgggaccgaaacatgaccccggcgtc
gctctggaacgcgagagagcgggcgagagaatagatccgtcgcttgtgcttaaggacctg
aaacctggaaggcatgtcacgaaagtgacgataggaaaattgtacactctcatggggaga
gagctcgtagcagtgaacgaaataccagcgggtaacgtcttcggcatcggcggcttagaa
gagcacgtactgaagaccgcgactctttccacgacgattgcctgtccctcgttcacggag
ctgacctccctcgcggttcccatcttaagggtagctctggagccgacgcatcccaacgac
ttaccgaagctcatcagcggcttgaaactgttgaaccaggcagacgcctgtgctctcgtg
cacatgcaagagaacggtgaaattatcctgagcacgatcggcgaggttcacttggagagg
tgcttggaagatcttaaattgaagtacgccaagatagatatcaatgtgtcggaaccaatt
gtgccattccgcgagactatagtgccacctccaaagctcgacatgatgaacgaagcgatt
gagaagaagaagacggatcatgtcagcctcgaactgtggacgtacaatcggcaatgtcgc
ttcgagatagacgcgaaacctcttccggagaatgtgacgaaactattggagaaaaacgca
aagctaataaaattgttagatagttattgtgataaatctatagaagagaatggagagcac
gagagtctcttttttgatgagagtcaaccgaacgaaaaatccatatccgacaggaagcag
aagaaaataaaaatattcaaaaatgaattggaggcagcttttctcgaggcgggatggagg
ggtaacgtattagataaaatatggtcattcggtccccgaaaatgcggactcaatatcctg
ttgaacgagacggattacaaacagaagaaattttgggagcagcgaagcacaaacatcgat
ccccgtgctatatacgacagcaacatagtcaatggattccagcttgctacattggctggt
cctttatgcgaagagctcatgatgggtgtctgtttcattttgaagaaatgggaaattttt
gattcttcacacagcgattacagcagcagtcagggaaatttgagtggtcaattgatgtca
gcgtgtaaagacggttgtcgacggatttttagtctacggcatgcccgattgatgactgca
atgtacagctgcagcgttttatccaattcggacgttctcggaaaattgtacgctgttttt
ggcaagagacaaggccgcatcatatccgcggaaaatgctcacggcttcggtggacaattc
agagtattggccactttaccggttctggagagcttccaccttgcgagagaactgcgtacg
caaacgtccggattggctagtccgcaactagtttttagtcattgggaggtaatcgaacag
gatccttactgggtgccatctacggaagaggaatatcttcacttcggtgaaaaggcggac
agcgataatcgagctaaatgctatatggatgctgttcgtcgaaggaaaggtcttcctgtg
agctcccaagtagttatacatgcgcaaaaacaacgcactctgaaaagataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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