KEGG T05778: 105283682

Ooceraea biroi (clonal raider ant): 105283682

Entry

105283682         CDS       T05778

Name

(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog

K15446

tRNA:m4X modification enzyme [EC:2.1.1.225]

Organism

obo Ooceraea biroi (clonal raider ant)

Brite

KEGG Orthology (KO) [BR:obo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:obo03016]
    105283682
Enzymes [BR:obo01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.225  tRNA:m4X modification enzyme
     105283682
Transfer RNA biogenesis [BR:obo03016]
Eukaryotic type
  tRNA modification factors
   Methyltransferases
    105283682

SSDB

Motif

Pfam:

TRM13 zf-TRM13_CCCH Methyltransf_32 zf-U11-48K

Other DBs

NCBI-GeneID:

105283682

NCBI-ProteinID:

XP_011344950

Position

10:complement(9009424..9011449)

AA seq 412 aa
MADNHCMYFVKRKKRFCRMTVREGKRYCGEHQQDANDAGDERVECPLDPKHTCYQSKLTK
HLNVCNAKQRLDAQPAFVVKGVNLDSETTTVTLHVPLSQLDETVVNTVIKKIHSAYEKLP
KFSTVILQHDTLKARLSDEPCGNNARKHLLQNASLLGHLEQAGLLQDDTCFIEFGAGRAQ
LTYWLGQIIKHKSNSCILLVDRSSHRHKNDNKLKREESCLMVKRVHADIADLRLNQIAEM
QSIKNKVGIAKHLCGTATDLAIRCLVKSMNDEPKVNVCGLVVAFCCHHKCEYSSYIGKEY
LQQCGFTADEFPVLCKIVSWATCGGRLKNDAKSQHEVFNEQHSGKDIDQSSELLNEREFV
GRKAKTLLNWGRLVFLQSVGFQAELFYYTSTNVSLENMCIVAKQERERERST

NT seq 1239 nt +upstreamnt +downstreamnt
atggcagacaatcattgcatgtattttgtcaagcggaagaaacgtttctgccgtatgaca
gtgcgagagggcaaacgatattgcggcgagcatcaacaagacgcgaacgatgcaggtgat
gaaagagtcgagtgtccactagatcctaagcacacgtgttatcaatcgaaattaacgaag
catttaaacgtgtgcaacgctaaacaaagattagacgcgcagcctgcgtttgtggtcaaa
ggcgtgaacttggacagcgagacgacgacagtgacactgcacgtgccattatcgcagctt
gacgaaactgtggtgaatacggtgataaagaagatccactccgcctatgaaaaattgcca
aaattttcgacggtcatactccaacacgacacgttgaaagctagattgagcgacgaacct
tgcggcaataatgcaagaaaacacttgcttcaaaatgcatctttgcttggacatttagag
caagctggtctcctacaggatgatacttgttttattgaatttggagcgggaagagctcaa
ttaacatattggttggggcagattataaaacacaaatcgaacagttgcattttgctggtt
gatcgttccagtcatcggcacaaaaatgacaataaactcaaaagagaagagagctgttta
atggtaaagagagtgcatgcggacattgccgatctgcggttgaaccagatcgcggagatg
cagtcaattaaaaacaaagttggtatagcgaagcatctttgcggcacggcgacagatctg
gcgatacgctgcctggtaaagtcaatgaacgatgagcccaaagtcaacgtttgcggccta
gtcgtcgcgttttgctgccatcacaaatgcgagtactcgtcttacataggcaaagaatac
ctacaacagtgcggcttcaccgcagacgagttccctgttttgtgcaaaatcgtcagttgg
gcgacttgtggcggtcgtttgaaaaatgatgctaaatcgcaacatgaagtcttcaacgag
caacatagtgggaaggatatcgatcaatcttcggaattattaaatgaacgcgaatttgtc
gggcggaaagctaaaacgctactaaactggggtcgcttggtgtttttgcaaagcgttgga
tttcaggctgaactattttattacacctccaccaacgtttccttagaaaatatgtgtatt
gtggcgaaacaagaacgagaacgagaacgttcaacgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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