KEGG   Ooceraea biroi (clonal raider ant): 105285228
Entry
105285228         CDS       T05778                                 
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X2
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03440  Homologous recombination
obo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    105285228
   03460 Fanconi anemia pathway
    105285228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obo03032]
    105285228
   03400 DNA repair and recombination proteins [BR:obo03400]
    105285228
Enzymes [BR:obo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     105285228
DNA replication proteins [BR:obo03032]
 Eukaryotic type
  DNA Topoisomerases
   105285228
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     105285228
   FA (Fanconi anemia) pathway
     105285228
SSDB
Motif
Pfam: Topoisom_bac zf-GRF Toprim zf-C4_Topoisom Zn_ribbon_recom HVO_2753_ZBP TF_Zn_Ribbon
Other DBs
NCBI-GeneID: 105285228
NCBI-ProteinID: XP_011347623
Position
5:complement(15029960..15039117)
AA seq 1048 aa
MKVLNVAEKHDAAKNIAGYLSRGTGRKREGLSVYNKIFDFNVQLWGQNCQMVMTSVSGHL
LNHEFVGAYRKWQGCHPLSLFDAPVSKQCPEDYVKIKKTLEREIRSCNALIVWTDCDREG
ENIGFEIIQVCQAIKPNIRIYRAKFSEITRQSVDRALHTLQEPDKAMSDAVDVRSELDLR
IGAAFTRFQTLRLQKVFPNTLGDMLISYGSCQFPTLGFVVERFLAIDQFKSEPYWKIKVT
DDRDGICVEFRWSRVRLFEKMPCQIFLDMCLERPEATVEKVTSKPKSKWRPLPLDTIELE
KQGSRKLRLNAKETMRIAERLYIQGLISYPRTETNIFPKELNLGSLVEQQVNNEAWGGFA
RGLLGTGISPRQGKKSDQAHPPIHPTKYTDTLQGNEARVYEFVVRHFLACLSKNAEARET
TVEINIAGEKFTANGLEIIARNYLDVYIYDKWESKQIRAYEQRQVFRPTSIDMVEEKTSP
PSLLTEAELIALMDKHGIGTDATHAEHIDTIKSRQYVGLPDNQHFMPGKLGIGLVMGYDN
MGFQMSKPHLRAGLEKDLQLICQRQKDPGEVLQDQINTYREVFRVAMERANLIDDALARH
LDERPIQTEQAQLAPAGDITIFKCPKCGSNMVLKDRRQGRGKYISCMGYPSCTNAIWLPE
AVEDVEILNETCTQCTGNMRKLRFKLVRNVIPLYGTSYTTCIGCDTTFNEMLNIKEDCVR
QTGRAALTDHHNTRDNSSGTTFTTTTSQSQNARQQRPTISGNMRYPASSRGYSGSIGTSS
TSDRRAQNQPSRANKPNTGSRSATVSDDEDYSSWISTNDFNSSENRSGQSRNPRNTNNRT
NTWGNIDNDAEVMCNCHETAIQLTVRKEGPNKGRLFYKCAKPQGTGCDFFLWATDSVEPR
GNTTSDDSSWTSSVNRNHGSAGSLPRGGGASNNDWGNASTSSVTCHCDQPARKLTVQKDG
PNKGRQFYGCPKGMNSTCNFFKWADEDDADNENTDWSNSAAARRGNQTRNRGGGSAPKRP
RLAGGGRKCGICGIEGHTRTRCPENMRD
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgaaagtcctcaatgttgccgaaaagcacgacgctgctaaaaatatcgctggttattta
tcacgcggtaccggtagaaagagagagggtttatccgtctacaataaaatctttgacttt
aatgtacaattatggggccaaaattgccaaatggtgatgacatctgtgtctggtcattta
ttaaatcacgagtttgtgggagcgtatcgcaaatggcagggctgtcatccgttaagcttg
tttgatgctccagtatccaaacaatgtcctgaagattacgtaaaaatcaagaaaaccttg
gagcgagaaatacgatcttgcaacgcgctgattgtttggacagattgtgacagagaaggc
gagaacataggcttcgagattatacaggtctgtcaagcaatcaaacctaatattcgtata
tacagagcaaaattttcggaaattacgagacaatctgtcgatagggctctgcacactttg
caggagccagataaggcaatgagcgatgctgtagacgtaagaagcgaactagatttaaga
attggtgctgcattcacgaggtttcaaaccttgagattgcaaaaagtctttcctaataca
cttggagacatgctcatcagttacggaagttgtcaatttccaacgcttggatttgtggtc
gagagattcttagctatcgatcagtttaaatccgagccatactggaagataaaagtgacc
gacgatcgcgacggcatatgtgtagagttcagatggagcagagtacgattattcgagaag
atgccttgccagatctttctggatatgtgtttggaacggccagaagctacggtggagaaa
gtaacgtccaaaccgaagagtaaatggagaccgttgcctctagacactattgaactggag
aagcaaggctcccgtaaattacgtctaaacgcgaaggaaacgatgaggatagcggagaga
ttgtacatccagggtctcatcagttatccacgcacggaaaccaatatatttccaaaggaa
ttaaatctgggatcgttagtggagcaacaagtgaacaatgaggcatggggtggctttgcg
cggggtttattgggcaccggaatatctcccaggcaagggaagaaaagtgatcaagcgcat
ccccctattcatccaactaaatacactgacactttgcaaggaaacgaagcgcgagtctac
gaattcgtggtgcggcatttcttggcttgcctgtcgaagaacgcggaggctcgggaaacg
acggtggaaatcaatatagcgggggaaaaattcacggccaacggtctggaaatcatagcg
aggaattatctcgatgtgtacatatacgacaagtgggagagcaagcagattcgcgcgtac
gaacagaggcaggtcttcaggccgaccagcatagatatggtggaggagaagacctcgcca
ccgagtttattaactgaagctgaattgatcgcgctgatggacaagcacggcattggtacg
gatgccactcacgccgagcatatcgacaccatcaagtccagacaatacgtggggttgccg
gacaatcagcattttatgccgggcaagttgggcatcggtctggtcatgggttacgacaac
atgggtttccagatgtccaagccacacctgcgcgcaggcctcgaaaaggatttacaactg
atatgtcagcgacagaaagatccaggtgaggtattacaggaccagattaatacataccgc
gaagtgttcagggtggcgatggaacgcgcgaacctgatagacgacgctttggcacgccac
ctcgacgagaggcccattcaaaccgagcaagcgcaactggcaccagcaggggacatcact
atcttcaaatgcccgaaatgcggctctaacatggtcttaaaggacaggaggcaaggaaga
gggaagtacatcagttgcatgggctatccgtcgtgtaccaatgcgatctggttgccagag
gctgtggaggatgtcgagatcctgaacgaaacgtgtactcagtgtacgggaaacatgcgg
aaattacgattcaaattagttaggaatgtgatacctttgtacggtacttcttacacgact
tgcataggctgtgatactacgttcaatgaaatgttgaatataaaagaggattgcgtgagg
caaactggaagagcggcacttaccgatcaccataacacgagggacaactcgtcgggcaca
acgtttaccacgaccacatcccagtcgcaaaatgctcggcaacaacggccaacaatttcc
ggcaatatgcggtatcctgcttcaagtagaggctatagcggctcgatcggaacttccagc
acatccgatagacgcgcgcaaaaccaaccgagtagagcaaataagccaaacaccggcagt
agaagcgcgacggtatcggacgatgaagactatagttcgtggattagtacgaatgacttt
aacagctcggagaacagatcaggccagtctagaaatcctcgtaacacgaacaacagaact
aatacgtggggtaatattgacaacgacgctgaggtcatgtgtaactgtcacgaaaccgcg
atccagttaacagtaaggaaggaaggcccgaataaaggacgcctgttctacaagtgcgct
aaaccacaaggcaccggctgcgactttttcttgtgggcaaccgatagcgttgaaccccgg
ggtaacacgacgagcgacgattcaagctggacatccagtgtaaatagaaaccacggaagt
gccggttcgcttcctcgcggtggtggtgcctctaataacgattggggaaacgcgtcgacg
agcagtgttacatgccactgcgatcaacctgctcgaaagttgacggttcaaaaagatggt
cctaataagggacgacaattttacggatgtccaaaaggcatgaactccacttgcaacttc
ttcaagtgggcggacgaggacgacgctgataatgaaaatacagattggagcaattctgct
gcggctagaagagggaaccaaacgcgtaatagaggtggaggcagtgctcctaaaaggccc
agactcgctggcggcgggagaaagtgtggaatctgtggaatcgaaggtcatacaaggact
agatgtccagaaaatatgagggattga

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