KEGG   Oryza brachyantha (malo sina): 102703937
Entry
102703937         CDS       T02995                                 
Name
(RefSeq) nuclear pore complex protein NUP160
  KO
K14303  nuclear pore complex protein Nup160
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102703937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obr03019]
    102703937
   03036 Chromosome and associated proteins [BR:obr03036]
    102703937
Messenger RNA biogenesis [BR:obr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102703937
Chromosome and associated proteins [BR:obr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    102703937
SSDB
Motif
Pfam: DUF5311 Nup160 Polysacc_deac_1
Other DBs
NCBI-GeneID: 102703937
NCBI-ProteinID: XP_015689514
UniProt: J3L9I7
Position
2:1679867..1695917
AA seq 1509 aa
MASPTPAARRIAGTEVPIPGSDRLRWIDVTVPSTAPPAAEGDPDPFVLVPPRAASGFHVV
SSGDSQCYLAWRLHEEHQNVLEVIELCASKEFPSTGLRLVFQEALCPFSFLCSREGGRRG
TPVYMLYVLTVSGVALLCHLHSPFSYMSGSIFPEDDIVEFSLQTQAQSAKVTAVTAKLGC
LVIGRQDGSICCYSLGKLAQNSPGFLNELRDDAGIGRLWTLVSRTKAVGPVQDIVTATVN
ERELLFVLHLDGSLRIWDILNHTKLLSYNVHSNDIEGQPSRVWIGDADDDQELISLAVLH
QGTVTPACDRVAVYGFSFGAGERFLFSPEPSVFSIPLLEGKLFDLKISMNKLWILKEVGS
MLYEIVQYDFDSEAMHSYVLQEDSISDQLFQSSENTLDDLVWTADSIFSSKKEQTFSFIS
SMFLRRLLQPGVNHCSALRETLLEHKRFISDSDFQSLTTSGLRKEILSTIEQEGSSQTAS
STAYHWRKFSARYLHNWCWSNRPYGLLLDTNREVFGLIRKGSFSLFRSLEDMEQLIYGSS
DDLCNLDGIGVNLLDNKSQSEILIEVLRCMSHINHLLGRSAAAIYHESLISSVISSDEII
SQILKILDTGFCPQSPSALITLLGTDAYAERRQTAHKSQRKFSVEMLLSFRKLQSKSTSW
SAVFDVIESFMKYLNTNVTIQEYELKRVYNVNTALLVQASSQVARTMFESTFDLFLFLSY
LVSIGGQVSLSQNDVARIKLKLFPVIQEILGQWIVLHFVGISPTTPPTIEDFSYQLSSLQ
LGKADDLSLHRKFGCSDFTLACLLDFPKSADGNVLSPWFPNPTELVNLVRRFSCSIMSGN
SAGNVDSFLSSTINLAAVLVRHGQYEAAQSLLGILETYINYEKASQVDRDTDLACSSCLH
LNGFCLLLLAHDEANIVLKESKVHEAICCFFRAASGEEAPKALQKFSVETGFQISGECRS
FSSWRLHYYEWAMQIFEQHSMSEGACQFALAALEQIDSIIDDGNEAEDVPETATMIKGRL
WANVFKYKLDLKNFREAYCAIVSNPDDDSKYVCLRRFIIVLCELGETKVLCNGEIPFTGL
VEKVEQELFWKAERSDLLSRPNLYKVLYSFEAYRNNWRKAAAYMYRYFVRLSREGNAGGA
RQLSHVLQERLHALSAAINALQLVDPSFAWLDSVCEADDQISPSKKPRNLLMENSAFGTD
SELSRLKFCVDIGILEKEYTLTESLYMLSTINSRFNFSDNQSIEALMDILINENMYDLVF
TIVLKFWKESGMKRELERVFAAIAQQCCPSRVGNSGKNLTNIQHVLLLTSSEDDARDGNG
NSIARVHQSQGSCHWETLELYLEKYKDLHPRLPIIVAETLLYTDPEIELPLWLVQMFKTT
KAGNRMISWGMSGTEADPAALFRLYINYGRHTEATNLLVEYLESFASSRPVDVLHRKKMS
ATWFPYTAIERLWCQLEEMQNAGHSMDQCDRLMKLLHGALISHLQQVVVDSDDVLSSVGG
GQGIGSQSN
NT seq 4530 nt   +upstreamnt  +downstreamnt
atggcctcacccacccccgccgcccgaagaatagccggcaccgaggtccccatcccggga
tccgacaggctgcggtggatcgacgtcaccgtcccctccaccgctccccctgcggcggag
ggcgatcccgaccccttcgtcctagtgccgccgcgcgccgcctcggggttccacgtcgtc
tcctccggcgactcgcagtgttacctcgcctggaggcttcatgaggaacaccaaaatgta
ctagaggtcatcgaactctgtgcttccaaggaattcccaagcactggactgcggttggta
ttccaggaggcgctatgcccgttctccttcttatgttcacgcgagggtggcagacgtggc
acacctgtatatatgctgtatgtgcttactgtttctggagttgctctcttatgccacttg
cacagcccattttcctatatgtctggttcaatatttcctgaagacgatatagttgaattt
agtctccaaacccaagcacagagtgctaaggttacagctgtaacagcgaagttaggatgt
ctagtgattgggcggcaagatgggtcaatctgctgttacagtcttggcaagttagctcag
aattcaccaggcttcttgaatgagctccgagatgatgctgggatagggcgtttatggact
ctcgtgtcaagaacaaaggctgtgggccctgtacaagatatagtaacagctaccgtaaat
gaaagggaactgctatttgttctccatctggatggaagtttgcgcatatgggatattctt
aatcacactaaacttctcagttacaatgttcactcgaatgatatcgaaggccaaccatct
agggtatggataggtgatgccgatgatgatcaagagttgatatctttggctgttctgcat
caaggcactgtgactccagcttgtgaccgcgtagctgtatatggtttcagttttggtgct
ggcgaaaggttcttgttctctcctgaaccttcggttttttctatacctttgctggaggga
aagctttttgacttgaagataagcatgaacaagctttggatacttaaggaagttggatca
atgctatatgaaatagtgcagtatgactttgattctgaggcaatgcattcgtatgtgcta
caagaagattctatcagtgaccagttgtttcaaagttccgagaatacattggatgatttg
gtctggacagctgattcaatattctcttcaaagaaggagcaaacattcagttttatttca
tccatgtttctgcggagactacttcaaccaggagtgaatcactgttctgctctacgtgaa
accttgttggagcacaagaggtttatatcagattctgatttccagtcacttacgactagt
ggattgcgaaaagaaatattatccaccatagaacaagagggaagttctcagacggcaagt
tctactgcttatcattggagaaagttttctgcacggtatcttcacaattggtgctggagc
aataggccatatgggttgcttcttgatacaaacagagaagtttttggtttaataagaaag
ggttcattttctctctttcgttctttggaggacatggagcagcttatttacggctcctct
gatgacctgtgcaatcttgatggcattggggtgaacttattggataataaatctcaatct
gaaatcctcattgaagtcctaaggtgcatgagccatataaaccatctactggggagatct
gctgctgcgatatatcatgaatccctcatcagttctgttatatcatctgatgaaatcatt
tctcagatcttaaaaattctggatactggtttctgtcctcaatctccctctgccctcatt
acattacttggaacagatgcttatgcagaaagaaggcagacagctcacaagagtcagagg
aagttttctgttgaaatgttactatcttttcgtaaattgcaatcaaaatccacatcctgg
tcagcagtatttgatgtgattgagagcttcatgaagtatttgaacacaaacgtgaccata
caagagtatgagctgaagagagtttacaatgtgaatactgcattattggttcaagctagt
tcacaggtagcaagaacgatgttcgaatccacttttgatctgtttctgttcctcagttat
ctggtctccattggtggacaggtctctttatcgcaaaatgatgttgccagaataaaactg
aagctgttcccggtgattcaagaaatactgggacagtggattgttctccactttgtagga
atttcacctacgacaccaccaactattgaggatttcagctatcagctttcttctctccag
ctaggaaaagctgatgacctatctttgcacagaaagtttggctgctctgattttacattg
gcctgtttacttgattttccaaaatctgctgacgggaatgttctttcaccctggtttcct
aatccaactgagcttgttaacttggtaaggaggtttagttgttcaattatgagtggaaat
agtgctgggaatgtggacagtttcttgagttccacaattaatctggcagcagttcttgtt
cgccatggtcaatatgaagctgctcagagtcttctgggcattctcgaaacatacattaac
tatgagaaagcatcccaagttgaccgggatacagatcttgcatgttcatcatgccttcat
ctcaatggattttgccttctgttgcttgcacatgatgaagcaaacattgtcctgaaagaa
tcgaaggttcatgaagctatctgttgcttcttcagagctgcatctggggaagaagctcca
aaggctctgcagaagttctctgtggaaacagggtttcaaatctctggggaatgcagatct
ttttcatcatggaggcttcactactatgagtgggcaatgcagatttttgagcagcactcc
atgagtgaaggggcatgccagtttgctcttgctgctcttgaacaaatagatagcatcatt
gatgatggaaatgaagctgaggatgtccctgaaactgcaactatgattaaagggcggcta
tgggccaacgtattcaagtacaaattggatttgaaaaactttcgggaggcgtattgtgca
atagtctcaaatccagatgatgatagcaagtatgtctgtttaaggcgtttcatcatagtt
ctttgtgagctcggcgagacaaaggttctttgcaatggcgagataccattcactggcttg
gtggaaaaagtggagcaagaactcttctggaaggctgagcggtcagatcttctgtctaga
ccgaatctttacaaggtcctttattcatttgaggcttataggaacaattggaggaaggct
gctgcatatatgtatagatattttgttagattgagtagagagggtaatgctggtggagcc
cgccaactctctcatgtgttgcaagagaggttgcatgctttgtctgctgctatcaatgca
ttgcagcttgtcgatccctcatttgcttggcttgattctgtatgtgaagcggatgatcaa
atctcaccaagtaaaaagccacgtaatcttttgatggagaactctgcttttggcacagat
tcagagctgtctaggttgaagttttgtgttgacattggaattcttgaaaaggaatataca
ctaacagaatcactgtatatgcttagcactataaattctagattcaacttttcagataac
caatctattgaagcactgatggatattcttataaatgagaatatgtatgacctggtgttc
acgattgtgctgaaattttggaaggagtcaggaatgaaaagggagttggaacgtgtattt
gctgccattgcacagcaatgctgccctagtagagtgggcaactcagggaagaatttgacc
aacatccaacatgttttactgctgacatcttctgaggatgatgcgcgggatggcaatggt
aacagtattgccagggtccatcaatcccaaggaagttgccactgggaaactcttgaacta
tatttggagaaatacaaagatttgcatccaaggttgcctatcattgttgcagaaacactt
ctttacacagaccctgagattgagctaccactttggctagttcagatgtttaagactacc
aaggctggtaacaggatgatttcatggggtatgtctggcacggaggcagatcctgctgca
ttatttagattgtatataaattatggccggcacacagaagcgaccaatttgttggtcgag
tacttggaatcatttgcatcatcgagaccggtggacgttctccaccgcaaaaagatgtct
gcgacctggttcccatacactgccatcgagaggctgtggtgtcagctagaagagatgcaa
aatgctgggcacagcatggatcagtgtgacaggctcatgaagttgctacatggagctctg
atcagtcacctgcagcaagttgtggttgactcagatgacgtgctttcatcagtcggagga
gggcaaggaatagggagccaaagcaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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