KEGG   Oryza brachyantha (malo sina): 102703956
Entry
102703956         CDS       T02995                                 
Name
(RefSeq) cryptochrome-1 isoform X2
  KO
K12118  cryptochrome 1
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:obr00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    102703956
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Cryptochrome_C
Other DBs
NCBI-GeneID: 102703956
NCBI-ProteinID: XP_006652348
Position
4:11737959..11743790
AA seq 702 aa
MSVSSSSSMGGGGGGGDAGVRTVVWFRRDLRVEDNPALAAAARAGGEVVPAYVWAPEEDG
AYYPGRVSRWWLSQSLKHLDASLRRLGAGRLVTRRSADAVIALLQLVRDTGATQLFFNHL
YDPISLVRDHRLKQMMAVEGIIVQSFNADLLYEPWEVVDDEGQSFTMFAPFWNRCLSMPY
DPAAPLLPPKRINSGDLSMCPSDDLIFEDDSERGSNALLARAWSPGWQNADKALTAFLNG
PLIHYSVNRKKADSASTSLLSPYLHFGELSVRKVFHLVRMKQLVWSNEGNRAAEESCTLF
LRSIGLREYSRYLSFNHPCSHEKPLLAHLRFFPWMVNECHFKIWRQGRTGYPLVDAGMRE
LWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDG
RELDRIDNPQLEGYKFDPRGEYVRRWLPELARLPTEWIHHPWDAPASVLQAAGVELGSNY
PLPIVGLDAANARLQEALSEMWQLEAASRAAMDNGMEEGLGDSSEVPPIEFPQELQMEID
REPARVTANVPTTARRREDQMVPTMTSSLNRAETEISADFLNSVDSRAEVPAHVHFEPGT
ERQDIVHTAAGNAAGTNVIHGHNNFQQPQHRMRNALAPSVSEASSGWTGREGGVVPVWSP
PAASGHSETFASDEADISSRSYLDRHPQSHRLMNWSQLSQSL
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgtcggtgtcttcctcgtcgtccatgggcggcggcggcggcggcggggacgcgggggtg
aggaccgtggtgtggttcaggagggacctcagggtggaggacaacccagccctggcggcg
gcggcgcgcgccggcggggaggttgtgccggcgtacgtgtgggctcccgaggaggacggg
gcgtactaccccgggcgcgtgtcgcggtggtggctcagccagagcctgaagcacctcgac
gcttcgctccggcggctcggcgccggcaggctggtgacgaggaggtcggccgacgccgtc
atcgcgctgctccagctcgtccgcgatacgggcgccacgcagctcttcttcaaccatctc
tacgacccgatctcactggtcagggaccaccggctgaagcagatgatggcagtggagggc
atcatcgtgcagtctttcaatgcagatctgctgtatgagccgtgggaggttgtggacgac
gaaggccaatcgttcaccatgttcgcgcctttctggaacaggtgcctcagcatgccgtat
gatcctgccgcaccactgttgcctcctaagagaatcaattcaggtgacctatcaatgtgc
ccatcagatgatctgatctttgaggatgactcggagaggggaagcaatgcgcttctcgct
cgagcatggtcaccaggctggcagaacgcagacaaggcactgacagctttcctgaatggt
cctctgattcactactcagtgaaccgcaagaaagcagacagcgcaagcacctccctcctg
tcaccgtacctgcactttggtgagctgagcgtgcgcaaagtcttccaccttgttcgaatg
aagcagcttgtgtggagcaatgaaggaaatcgtgcagctgaggagagctgcaccctgttt
ctccgctccattggcctccgggagtactcacggtacctgagcttcaaccacccgtgcagc
catgagaagcccctgctggcacacctcaggttctttccctggatggtcaacgagtgccac
ttcaagatttggcggcagggaagaactggttacccacttgttgatgccggcatgagggag
ctgtgggccacagggtggttgcatgatcgcattcgtgtggtagtgtcaagtttcttcgtc
aaagtccttcaactgccatggcgatgggggatgaagtacttctgggacactttgctagat
gctgatcttgagagtgatgccctaggttggcagtatatctctggctctctccctgatggc
cgagagcttgaccgcattgacaatccccagctcgaagggtacaagtttgatccacgtggg
gagtatgtccgacggtggctccctgagcttgcaaggttgccgactgaatggatacaccat
ccatgggatgcacctgcatctgtgctgcaagctgcaggagttgagctaggctccaactac
cctctccctatagttgggctggatgcagccaacgccaggctgcaagaagcactgtcagaa
atgtggcagctcgaggcagcatccagggccgcaatggacaatggaatggaggaaggccta
ggtgactcctccgaggttcccccaattgagtttcctcaagaactacagatggagattgac
cgagaaccggcccgggtcacagccaatgtgccgacaacagctcgaaggcgcgaggatcag
atggtgcctacgatgacatcttcactgaacagggctgagactgagatttcggccgacttt
ctgaacagcgtggacagtagggcagaggtcccagctcatgtgcattttgagcctggaact
gagcggcaagacattgtccatacagctgcaggaaatgctgctggaacaaatgttattcac
gggcacaacaatttccagcaaccccagcaccggatgcgaaatgctctagcaccatctgta
tcagaggcatcgagtggctggaccgggagagagggaggcgtggtcccagtttggtcgcct
cctgcagcatcaggccattcagaaacttttgcgtctgatgaagctgacatttctagtagg
agttatttggataggcatccacagtcacaccggttgatgaactggagccagttatcgcag
tcattgtga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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