KEGG   Oryza brachyantha (malo sina): 102722121
Entry
102722121         CDS       T02995                                 
Name
(RefSeq) splicing factor U2af small subunit B isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102722121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obr03041]
    102722121
Spliceosome [BR:obr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102722121
 Complex B
    102722121
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 HATPase_c Autophagy_act_C
Other DBs
NCBI-GeneID: 102722121
NCBI-ProteinID: XP_006654790
UniProt: J3M9R5
Position
5:18814209..18819198
AA seq 292 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP
GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE
QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL
RRKLYGGRSRRSHGRSRSPSPRHRRGNRDRDDFRPRDRDGYRGGGGGGGGDSYRGGGGGG
RRGGGSRYDRYDDGGRRRHGSPPRRARSPVRESSEERRAKIEQWNREREEKQ
NT seq 879 nt   +upstreamnt  +downstreamnt
atggcggagcatttggcttcaatttttgggactgagaaggatagggtcaactgccccttc
tacttcaagattggggcttgccgtcatggagatcgttgctcccgtctgcacaataggcca
actgtgtcaccaactattgtgcttgctaacatgtatcagcgtccggatatgattacacca
ggagttgatgctcaaggtcagcctattgatcctgaaaagatgcaggagcactttgaggat
ttctatgaggatatctatgaggaactgagcaagtttggtgaggtcgagaccctcaatgtc
tgtgataaccttgctgaccacatgatagggaatgtctatgtccagttcagggaggaagaa
caggcagtcgccgctcataatgctcttcaaggtcgcttctactcggggcgcccaataatt
gttgagtattcccctgtgaccgattttcgtgaggcgacctgtaggcagtttgaggagaac
agctgcaaccgtggtggctactgtaattttatgcatgtaaagcagattggtagggaactg
aggaggaagctctacgggggacgttcccggaggagccatggtagaagccgcagcccaagc
ccacgtcacaggaggggcaaccgtgaccgtgatgatttccgcccccgtgaccgtgatggt
taccgtggtggtggtggtggtggtggtggtgacagttaccgtggtggcggtggcggtggt
cgcaggggtggaggcagcaggtatgaccggtatgatgatgggggaaggcgcaggcatggc
agccccccgaggcgtgcaaggagcccagtcagggaaagtagtgaggagcgcagggcgaag
attgagcagtggaaccgtgagcgggaggaaaaacagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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