KEGG   Opitutaceae bacterium TAV5: OPIT5_17265
Entry
OPIT5_17265       CDS       T03683                                 
Name
(GenBank) ribonuclease HIII
  KO
K03471  ribonuclease HIII [EC:3.1.26.4]
Organism
obt  Opitutaceae bacterium TAV5
Pathway
obt03030  DNA replication
Brite
KEGG Orthology (KO) [BR:obt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OPIT5_17265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obt03032]
    OPIT5_17265
Enzymes [BR:obt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     OPIT5_17265
DNA replication proteins [BR:obt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     OPIT5_17265
SSDB
Motif
Pfam: RNase_HII DUF3378
Other DBs
NCBI-ProteinID: AHF91709
UniProt: W0J4S7
Position
4012260..4013300
AA seq 346 aa
MPKKPASADDEAPKKISSYTIKLDDAQMEILHDICKARHWMPFEVAYTRFAYKADHLKLN
LSAYTSGKVVIAGKGTEDFVRDVLEPEVTGAPKLGYDEVLHPDWFEAHAGLDESGKGDFF
GPVVAATVIAERSAIEAWRKAGVQDSKKITGNRILELDRLIRETPGVVARAVYCGMPKYN
ELMARPRASLNKLLAWQHAKALLQALGEKPVPWGLLDQFSEQPLVQRELTRLGGAPAGFD
LRMRTKAEEDPVVAAASIVARAEYVRIMNMLSQRFGEPLQKGASALVKKQGLAIMEKFGA
RALGDFAKLHFRTAWEIVKEAGKLDELPLPEPKERVEFRSIGRKPA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgccgaaaaagcccgcctcggccgacgacgaggctccgaagaaaatttccagctacacc
atcaagctcgacgatgcgcagatggagatcctgcacgacatctgcaaggcgcgtcactgg
atgccgttcgaggtcgcgtacacgcgcttcgcctacaaggccgaccacctcaagctcaac
ctctccgcctacaccagcggcaaggtcgtcatcgcgggcaagggcacggaggatttcgtg
cgcgacgtgctcgaacccgaggtcaccggggcgccgaaactcggctacgacgaggtgctc
catcccgactggttcgaggcccacgccgggctcgacgaaagcggcaagggcgactttttc
ggcccggtcgtcgccgccaccgtgatcgcggaaagatccgccatcgaggcctggcgcaag
gccggcgtgcaggactccaaaaaaatcaccggcaaccgcatcctcgaactcgaccgcctc
atccgcgagacgcccggcgtcgtggcccgcgccgtttattgcggcatgccgaaatacaac
gaactgatggcgcgccctcgcgccagcctcaacaagctgctcgcctggcagcacgccaag
gccctcctccaggcgctcggcgagaaacccgtgccgtggggtctgctcgaccagttcagc
gaacaacccctcgtgcaacgcgaactcacccgcctcggcggcgcgcccgccggcttcgac
ctgcgcatgcgcaccaaggccgaagaagaccccgtagtcgccgccgcgtccatcgtcgcc
cgtgccgaatacgtgcggatcatgaatatgctctcgcaacgcttcggcgaacccctgcaa
aaaggcgccagcgccctcgtgaaaaagcagggcctcgccatcatggaaaaattcggcgcc
cgcgcgctcggcgacttcgccaagctgcatttccgcaccgcctgggagatcgtgaaggaa
gccggcaagctcgacgaactcccgctccccgaaccgaaggagcgcgtcgagttcaggtcg
atcggccgcaaaccggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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