KEGG   Afipia carboxidovorans OM5 (Mississippi): OCAR_4122
Entry
OCAR_4122         CDS       T00783                                 
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
oca  Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:oca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    OCAR_4122 (mutS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oca03400]
    OCAR_4122 (mutS)
DNA repair and recombination proteins [BR:oca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     OCAR_4122 (mutS)
SSDB
Motif
Pfam: MutS_V MutS_I MutS_III MutS_II MutS_IV AAA_14 AAA_29 ABC_tran
Other DBs
NCBI-ProteinID: ACI91273
Position
121324..124062
AA seq 912 aa
MTMHAPYPDTPATPEPKDTATARVTPMMEQYLEIKAANPGLLLFYRMGDFYELFFEDAET
ASRALGIMLTKRGKHQGEDIPMCGVPVERSDDYLHRLIALGHRVAVCEQMEDPAEARKRG
AKSVVRRDVVRLVTPGTLTEDNLLDAKTNNYLMAIARTRASNGDDRLGLAWIDISTSEFT
VSECSASDLATTLARVNPNEIIVPDAIFGDETLGPTLREHTAVTPLTRDVFDSASAEQRL
CDYFAVATMDGLATLSRLEATAAAAAVTYVERTQVGKHPPLSPPAREDAGTTLAIDPATR
ANLELTRTLAGERRGSLLDTIDLTVTAAGSRLLAQRLATPLTDIAAITRCHDAVAAFVAD
TAATHDLRTILNAAPDMSRALARLSVGRGGPRDLAGLRDGILAADAAIARLAQMNSPPQE
ITTAIAALRKPSRDLAEILARALAEQLPLSKRDGGFVRERYDATLDETRSLRDASRLVVA
SMQARYAEDTGVKGLKIKHNNVLGYFVEVTAQHGDKLMAAPLNATFIHRQTLAGQVRFTT
SELGEIEARIANAGDRALGLELEIFERLCAEAIAIGDDLRAAAHAFAVLDVATSLARLAV
EQDYVRPDVDDSLAFSIEGGRHPVVERALKRDGQPFIANSCDLSPAPSQANGQIWVLTGP
NMAGKSTFLRQNALIALLAQIGSFVPAKRARIGVVDRLFSRVGAADDLARGRSTFMVEMV
ETAAILNQAGERALVILDEIGRGTATFDGLSIAWASIEHLHDANKCRALFATHYHELTAL
SAKLPRLFNATVRVKEWHGDVVFLHEVLPGAADRSYGIQVAKLAGLPPAVIARAKTVLAK
LEAQDRSSGAQTLIDDLPLFAVTARASESEEVSSPKDTALIEALNAIEPDELTPREALDA
LYALKGKLPKQG
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgacgatgcacgccccataccccgacacgcccgcaacaccagagccgaaggacacggcg
accgcgcgcgtcacgccgatgatggagcagtacctcgagatcaaggccgccaatccgggg
ttgttgctgttctaccggatgggcgacttctacgaattgttcttcgaggacgccgagacc
gcatcgcgcgcgctcggcatcatgctcaccaagcgcggcaagcatcagggtgaagacatc
ccgatgtgcggcgtgccggtcgagcgctccgacgactacctgcatcgcctgatcgcactc
ggccatcgcgttgcggtgtgcgagcagatggaagacccagccgaagcgcgcaagcgtggc
gcgaagagcgtggtgcggcgcgacgtggtgcggctcgtcacgcccggcacgttgacagaa
gacaatcttctcgacgccaagaccaacaattacctgatggcgatcgcacgcacccgcgcc
tccaacggcgacgatcgtctcggcctcgcgtggattgacatctcgacctcggaattcacc
gtcagcgaatgcagcgcgagcgaccttgccaccacgcttgcgcgcgtcaatcccaacgag
attatcgtgccggacgcgatcttcggcgacgaaacgctcggcccgaccttgcgcgagcac
accgcggtgacgccgctgacgcgcgacgtgttcgacagcgcaagcgccgaacagcgactg
tgcgattacttcgcggtcgccacaatggatgggctggccaccctgtcgcggctcgaagcg
actgctgcggctgcggccgtgacctatgtcgagcgcacgcaggtcggcaagcatccgccg
ctctcgccgcccgcacgcgaggacgccggcacgacgcttgcgatcgaccccgcgacgcgc
gccaatctcgaactcacccgcacgcttgcgggcgagcggcgcggctcattgctcgacacc
atcgatctcaccgtgacggctgccggctcgcgcctgcttgcacaacggcttgccacgcct
ctcaccgacatcgccgccatcacacggtgccacgatgccgtcgcggcgtttgtcgctgac
accgccgcgactcacgacttgcgcacgatcctgaatgccgcgcctgacatgtcgcgcgcg
ctggcgcggctttcggttgggcgcggcggcccgcgcgatctcgcaggattgcgcgacggc
attctcgctgccgatgccgcgattgcccggctcgcccagatgaactcgccgccgcaggaa
atcacaacggcaatcgccgcactgaggaagccttcgcgcgatcttgctgaaatcctcgcc
cgcgcactcgccgagcaattgccactgtcaaagcgcgacggcggttttgtgcgtgagcgt
tacgacgcgaccctcgacgagacccgctcgctacgcgatgcctcgcgcctcgtcgtcgca
tcgatgcaggcgcgctatgccgaagacaccggcgtcaagggcctcaagatcaagcacaac
aatgtgcttggctatttcgtcgaggtcaccgcgcagcacggcgacaagctgatggccgcg
ccgcttaacgcgaccttcatccaccggcagacactggcggggcaggtccgcttcaccacc
tccgagctcggcgagatcgaggcccgcatcgccaatgcgggcgaccgtgcgctcggcctc
gagcttgagattttcgagcggctctgtgccgaggccattgccatcggcgacgatctgcgc
gccgctgctcacgccttcgccgtgctcgatgttgcaacatcactggcgcggcttgccgtg
gagcaggattacgttcgccccgacgtcgacgactcgcttgcgttcagtatcgaaggcggc
cgtcatcccgtcgtcgagcgcgcgctgaagcgcgacggccaaccgttcatcgccaatagc
tgcgatctgtcgcccgcgccgtcgcaggccaatggccagatctgggtcctcaccggcccc
aacatggcgggcaaatcgaccttcctgcgccagaacgcattgatcgccctgctcgcgcag
atcggcagtttcgtgcccgcgaagcgcgcgcggatcggcgttgtcgatcgcctgttctca
cgcgtgggcgcggccgacgatctggcgcgcggccgttcgaccttcatggtggagatggtc
gagaccgccgcgatcctcaatcaggcaggtgagcgcgcgctggtgattctcgacgagatc
gggcgcggcaccgcaaccttcgatggcctgtcgatcgcctgggcctcgatcgagcatctg
cacgacgccaacaaatgccgcgcactgtttgcgacgcactatcacgaactcaccgcgctc
tcggcaaaattgccgcgtctgttcaacgccacagtgcgagtgaaggaatggcacggcgat
gtcgtgttcctgcacgaggtattgccgggcgcggcggatcgatcctacggcattcaggtt
gcgaagcttgcaggcctgccgcctgcagtgatcgcccgcgccaagacggtgcttgccaaa
ctcgaggcgcaggaccgtagctccggcgcacagaccttgatcgacgacctgccgctgttc
gcagtgaccgcacgggcaagcgaaagcgaggaagtctcctcgcccaaggacaccgcgcta
atcgaagcgctcaatgcgatcgagccggacgagttgaccccgcgcgaagcattggatgcg
ctctacgcgctgaaagggaagctgccgaaacaaggctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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