KEGG   Afipia carboxidovorans OM5 (Mississippi): OCAR_4185
Entry
OCAR_4185         CDS       T00783                                 
Name
(GenBank) conjugal transfer protein
  KO
K20531  type IV secretion system protein TrbF
Organism
oca  Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:oca00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCAR_4185
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:oca02044]
    OCAR_4185
Secretion system [BR:oca02044]
 Type IV secretion system
  Trb secretion system protein
   OCAR_4185
SSDB
Motif
Pfam: VirB8 wHTH-PRTase_assc
Other DBs
NCBI-ProteinID: ACI91334
UniProt: B6JA68
Position
complement(191520..192209)
AA seq 229 aa
MSVFKRPAAHYGKTPEPVTPYQKAAQVWDERIGSARVQAKNWRYMAFGSLILSAGFAAAL
VWQSARGTVVPWVVQVDRLGQAQSVAPATADYRPSDPQIAWHLGRFIEQVRSIPADAIIV
RQNWLRAYEWTTDRGAAALNDYARANDPFTKVGRRQVAVEVSSVIRASPDSFRVAWTERH
YENGQLAVTERWTAILTIVIQTPRDADRLRANPLGIYVNAISWSREMTP
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagcgttttcaagcgacccgccgcccactatggcaagacacccgaacccgtcacgccc
tatcagaaggccgcgcaagtctgggacgagcgcatcggctcggcccgtgtccaggccaag
aactggcgctatatggccttcgggtcattgatcctctcggccggctttgccgccgcattg
gtttggcagtccgcacgcggaacggtcgtgccttgggttgttcaggtcgaccgcctgggc
caggcccaatccgtcgctcccgcgactgccgactatcgcccttccgatccccagatcgcc
tggcatcttggtcgcttcatcgaacaggtccgctccattccggccgacgcgatcatcgtc
cggcagaattggctgcgagcctatgaatggacgaccgatcgcggcgcggcggctctcaac
gactacgctcgcgccaacgaccccttcaccaaagtcggccgccgccaggtcgccgtcgag
gtctccagcgtcatccgcgcctctccggactcgttccgcgtcgcttggacggaaagacac
tacgagaatggccagcttgccgtgaccgaacgctggaccgcgatcctgaccattgtgatc
cagacgccgcgcgacgcggaccgtctgcgcgccaatccgctggggatttacgtcaatgca
atttcctggtcgcgggagatgacgccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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