KEGG   Afipia carboxidovorans OM5 (Mississippi): OCAR_6428
Entry
OCAR_6428         CDS       T00783                                 
Name
(GenBank) conjugal transfer protein
  KO
K20529  type IV secretion system protein TrbD
Organism
oca  Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:oca00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCAR_6428
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:oca02044]
    OCAR_6428
Secretion system [BR:oca02044]
 Type IV secretion system
  Trb secretion system protein
   OCAR_6428
SSDB
Motif
Pfam: VirB3
Other DBs
NCBI-ProteinID: ACI93541
Position
complement(2370209..2370472)
AA seq 87 aa
MEEDVRGFFAPVHRALTEPILLGGAPRTVAIANGTLAGAVGLGLRLWIAGLVIWAIGHFA
AIWAAKRDAQFVDVGRRHLRYPAHMDV
NT seq 264 nt   +upstreamnt  +downstreamnt
atggaggaagacgtccgcggcttcttcgcgccggtgcatcgcgcgctcaccgagccgatc
ctgctcggcggtgcgccgcgcacggtcgccatcgccaacggcacgctcgcaggcgcggtc
gggctcggcctgcgcctgtggatcgcgggcctcgtcatctgggcgatcgggcatttcgcc
gcgatatgggcggcgaagcgtgacgcgcagttcgtcgacgtcggccgccggcacctgcgt
tacccggcgcacatggacgtgtga

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