KEGG   Afipia carboxidovorans OM5 (Mississippi): OCAR_6965
Entry
OCAR_6965         CDS       T00783                                 
Name
(GenBank) uracil-DNA glycosylase, family 4
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
oca  Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    OCAR_6965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oca03400]
    OCAR_6965
Enzymes [BR:oca01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     OCAR_6965
DNA repair and recombination proteins [BR:oca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     OCAR_6965
SSDB
Motif
Pfam: UDG DUF1127
Other DBs
NCBI-ProteinID: ACI94073
Position
2922226..2923053
AA seq 275 aa
MTTMMSERPPTQHELLAFYLEAGVDCALAEEPVNRLSETEAEPAPMRATPVRERPAPLPV
PRTDVAPAPDVAIESARELAPQAKTLDELRGLLEVFDGCALKMTATRLVFGDGNPQARVM
FVGEAPGRDEDLQGIPFIGRSGKLLDLMLASIGLDRTSAYIANVIPWRPPGNREPSPHET
QMCLPFIRRQIELVDPDVLVCLGKPSSQAVLELKDGIVKSRGRWFDYNTGTRMIRAMATF
HPAYLLRQPIYKRMTWKDLRMIRRALAALPPRESA
NT seq 828 nt   +upstreamnt  +downstreamnt
atgaccaccatgatgtccgagcgcccgcctacacagcacgaactgctggctttctatctg
gaagccggcgtcgattgcgcgctcgcagaagagcccgtcaatcgcctgtcggagacagaa
gcggagcccgcaccgatgcgcgcgacgcccgtcagggaacggccggcccctcttcccgta
ccgcgcaccgacgtcgcgcccgcgccagacgtcgccatcgaatccgcgcgcgaactcgcc
ccgcaagcgaagaccctggatgagttgcgcggcctgctcgaagtcttcgacggctgtgca
ttgaagatgacagcgaccagattggttttcggtgatggcaatccgcaggcgcgcgtcatg
ttcgtcggcgaagcgccgggccgcgacgaagacctgcagggcattcctttcatcggccgc
tcgggcaagcttctcgatctgatgctcgcctcgatcgggctcgaccgcaccagcgcctat
atcgcgaacgtcatcccctggcgcccgcccggcaaccgcgagccgtcgccgcatgagacg
cagatgtgcctgccgttcatcagacggcagatcgaactcgtcgacccggatgttcttgtc
tgtctcggcaagccatcctcacaggccgtgctcgaactcaaggacggcatcgtgaaaagc
cgcgggcgctggttcgactacaacaccggcacgcgcatgatccgcgcgatggcgactttc
caccccgcctacctgctgcgccaaccgatctacaagcgcatgacatggaaagatttgcgc
atgatccgccgcgcgcttgcagcgttgccgccgcgtgagagcgcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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