KEGG   Oceanicola sp. D3: FHY55_12270
Entry
FHY55_12270       CDS       T06139                                 
Name
(GenBank) tyrosine--tRNA ligase
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
ocd  Oceanicola sp. D3
Pathway
ocd00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    FHY55_12270
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ocd01007]
    FHY55_12270
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocd03016]
    FHY55_12270
   03029 Mitochondrial biogenesis [BR:ocd03029]
    FHY55_12270
Enzymes [BR:ocd01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     FHY55_12270
Amino acid related enzymes [BR:ocd01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   FHY55_12270
Transfer RNA biogenesis [BR:ocd03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    FHY55_12270
 Prokaryotic type
    FHY55_12270
Mitochondrial biogenesis [BR:ocd03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    FHY55_12270
SSDB
Motif
Pfam: tRNA-synt_1b TyrRSs_C S4 S4_2
Other DBs
NCBI-ProteinID: QDC09969
UniProt: A0A5B8BZJ1
Position
2420415..2421665
AA seq 416 aa
MTYHPKSDFMAVMIERGFLADCTDYQGLDEALIKGVVPGYIGFDATAKSLHVGSLIQIMM
LRWLQKTGHQPITLMGGGTTKVGDPSFRADERPLLTPEQIDDNIAGIKQVFAKYLDYEAE
TPALMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFDSVKSRLDREQSLSFLEFNYMILQ
AYDFLELNRRYGCLVQFGGSDQWGNIVNGIDLTRRVIDQQIFGLTSPLLTTSDGKKMGKS
ADGAIWLNAEMCAPYEFWQFWRNTTDADVGRFLKLYTELPIDECERLGALEGSEINDAKI
RLANEVTTLCHGAEAAAAAEATAREVFEKGGVGDDLPTLTLTAADVAEGISVVQLITRAG
LAKSGKEAKRLIADNGARIDDAPLTDAGLMLDAAALSAPVKLSAGKKRHALVVLEG
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgacctaccaccccaaatcggacttcatggccgtaatgatagagcgaggcttcctggcg
gattgcaccgactatcaaggccttgacgaagcactgatcaaaggcgtggtcccgggctat
atcggctttgatgccacggccaaatcgctccacgtcggctcgctcatccagatcatgatg
ctgcgctggctgcaaaaaaccggccaccagccgatcaccctgatgggcggcggcaccacc
aaggtgggagacccgtctttccgcgccgacgagcgcccgctgctgacgcccgagcagatt
gatgacaacatcgccggcatcaagcaggtgtttgcaaaatacctcgactacgaggccgaa
accccggccctgatgctcaacaatgccgaatggctcgatgggctcaactacctggaattc
ctgcgagatatcggccgccacttctcggtcaaccggatgctctccttcgatagcgtcaaa
tcccgtctcgaccgcgagcagtcgctcagcttcctcgaattcaactacatgatcctgcaa
gcctacgacttcctcgagctcaaccgccgctacggttgcctcgtccagttcggcggctcc
gatcaatggggcaacatcgtcaacggcatcgacctcacccgccgggtgatcgaccagcag
atcttcggcctcacctcgcccctgctgaccacctcggacggcaagaagatgggcaaatcg
gccgatggcgccatctggctcaacgccgaaatgtgcgcgccctacgagttctggcagttc
tggcgcaacacaaccgatgccgacgtcggccgcttcctcaagctctacacggagctgccc
attgacgaatgcgaaaggctcggtgcgctagaaggctccgagatcaacgacgccaagatc
cggctcgcaaatgaggtcacaaccctctgccacggcgccgaggctgcggcagcggcagag
gcgacggcgcgtgaggttttcgaaaagggcggcgtgggcgatgatctgcccaccctcacc
ctcacggcggcggatgtggccgaaggtatctcggtggtgcagctgatcacccgcgccggg
ttggcaaaatcgggcaaggaagccaagcgcctgatcgccgacaatggcgctcggatcgac
gatgcaccgctcaccgacgcgggcctgatgcttgacgccgccgcgctgtctgcaccggtc
aagctctccgccggcaagaagcgtcacgccctcgtcgtgctggaggggtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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