KEGG   Oceanicola sp. D3: FHY55_17350
Entry
FHY55_17350       CDS       T06139                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ocd  Oceanicola sp. D3
Pathway
ocd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FHY55_17350 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocd03019]
    FHY55_17350 (groL)
   03110 Chaperones and folding catalysts [BR:ocd03110]
    FHY55_17350 (groL)
   03029 Mitochondrial biogenesis [BR:ocd03029]
    FHY55_17350 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocd04147]
    FHY55_17350 (groL)
Enzymes [BR:ocd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     FHY55_17350 (groL)
Messenger RNA biogenesis [BR:ocd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     FHY55_17350 (groL)
Chaperones and folding catalysts [BR:ocd03110]
 Heat shock proteins
  HSP60 / Chaperonin
   FHY55_17350 (groL)
Mitochondrial biogenesis [BR:ocd03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    FHY55_17350 (groL)
Exosome [BR:ocd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   FHY55_17350 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   FHY55_17350 (groL)
  Exosomal proteins of breast cancer cells
   FHY55_17350 (groL)
  Exosomal proteins of colorectal cancer cells
   FHY55_17350 (groL)
  Exosomal proteins of bladder cancer cells
   FHY55_17350 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 VP4_helical EAD9 cwf21
Other DBs
NCBI-ProteinID: QDC10890
UniProt: A0A5B8BW99
Position
complement(3476102..3477745)
AA seq 547 aa
MAKDVKFDTDARNRMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIE
LEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGMKSVAAGMNPMDLKRGID
LATSKVVQAIKDAAREVNDSAEVAQVGTISANGEAEIGQQIADAMQKVGNEGVITVEENK
GLETETEVVEGMQFDRGYLSPYFVTNPDKMIAELEDCMILLHEKKLTSLQPLVPLLEQVI
QSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIGILTGGQVI
SEDLGMKLENVTMDMLGTAKTVTITKDETTIVDGHGEKSEIEARVSQIRQQIEETTSDYD
REKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGVVVGGGVALIQ
GAKALDGVTGANSDQNAGVAIVRKALEAPLRQIAENAGVDGSVVAGKIRESDDKAFGFNA
QTEEYGDMFKFGVIDPAKVVRTALEDASSVAGLLITTEAMVADKPSKEGAGGGAPDMGGM
GGMGGMM
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcaaaagacgtcaagtttgataccgacgcccgcaaccgcatgctgaagggtgtcaac
atccttgccgatgcggtcaaagtcaccctcggccccaaaggccgtaacgttgtgctcgac
aagagcttcggcgcgccccgcatcaccaaagacggtgtttcggttgccaaagagatcgag
ctcgaagacaagttcgagaacatgggcgctcagatggtgaaggaagttgcttcccgcacc
aacgacgaggccggtgacggcaccaccactgccaccgtgctggctcaggccatcatcaaa
gagggcatgaagtcggttgccgctggcatgaacccgatggacctcaagcgcggcatcgac
ctcgcgacctccaaagtggttcaggccatcaaggacgccgcccgcgaagtgaacgactcc
gccgaagtggctcaggttggcaccatctccgccaacggcgaagccgagatcggccagcag
atcgctgacgcgatgcagaaggtcggcaacgagggtgtcatcaccgtcgaagagaacaag
ggcctcgagaccgagactgaagttgtcgaaggtatgcagttcgaccgtggctacctcagc
ccctacttcgtcaccaaccccgacaagatgatcgcggagctggaagactgcatgatcctg
cttcacgagaaaaagctgacctcgcttcagccgctcgtgccgctgctcgagcaggtgatc
cagagccagaagccgctcctcatcatcgctgaagacgttgaaggcgaggcgctggccact
ctcgtggtcaacaagctgcgtggcggcctgaagatcgctgccgtcaaggcaccgggcttc
ggcgatcgccgcaaggccatgctgcaggacatcggcattctgaccggcggtcaggtgatc
tccgaagacctcggcatgaagctcgagaatgtcactatggacatgctcggcaccgccaag
accgtgaccatcaccaaggacgaaaccaccatcgtggacggccatggcgagaagtccgaa
atcgaggcacgcgtttcccagatccgtcagcagatcgaagagaccacctccgactacgac
cgtgagaagctgcaagagcgcgtggccaagctggccggcggtgttgccgttatccgcgtc
ggcggcatgaccgaagtggaagtgaaagagcgcaaggaccgtgtcgatgacgcgctcaac
gcgactcgcgctgccgttcaggaaggcgttgtcgtcggtggcggcgtggccctgatccag
ggtgccaaggcgcttgacggtgtgactggtgcaaactccgaccagaacgccggtgtggcc
atcgtgcgcaaggcgctcgaagctccgctgcgtcagatcgccgagaacgccggtgtcgac
ggttccgtcgtcgcgggcaagatccgcgaaagcgacgacaaggccttcggcttcaacgct
cagaccgaagaatatggcgacatgttcaaattcggcgtgatcgaccccgccaaggtggtc
cgcaccgcgctggaagatgcttcttccgtggccggcctgctcatcaccaccgaggcgatg
gttgccgacaagccctccaaagagggtgccggcggcggtgcccccgacatgggcggtatg
ggcggcatgggcggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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